IOI Digital Microbiology Hub
A web-based bioinformatics platform for Antimicrobial Resistance (AMR) research in bacteria
The Digital Microbiology Hub provides a user-friendly interface for researchers to analyse their genomic data, perform assembly, search genes of interest, compare genes and call AMR genes
Resources
Web apps
Genome-Forge Pro genome assembly from short reads
SpeciesID species identification from genome assembly
GeneScanner gene comparison against a population
AMRCaller antimicrobial resistance gene calling
BLAST sequence search and alignment against collections
Gene Presence find genes present in genomes
Genome Comparator genome comparison from isolates
