Sample Input file Sequence type Protein id Contig id Start Stop Strand Element symbol Element name Scope Type Subtype Class Subclass Method Target length Reference sequence length % Coverage of reference % Identity to reference Alignment length Closest reference accession Closest reference name HMM accession HMM description SRR13968423_contigs SRR13968423_contigs.fa nucleotide SRR13968423_contig00001 131963 133318 + glpT_A100V Staphylococcus aureus fosfomycin resistant GlpT core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 452 452 100.0 99.56 452 WP_001010111.1 glycerol-3-phosphate transporter GlpT SRR13968423_contigs SRR13968423_contigs.fa nucleotide SRR13968423_contig00001 131963 133318 + glpT_V213I Staphylococcus aureus fosfomycin resistant GlpT core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 452 452 100.0 99.56 452 WP_001010111.1 glycerol-3-phosphate transporter GlpT SRR13968423_contigs SRR13968423_contigs.fa nucleotide SRR13968423_contig00001 357676 359025 - tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100293.1 tetracycline efflux MFS transporter Tet(38) SRR13968423_contigs SRR13968423_contigs.fa nucleotide SRR13968423_contig00003 109853 110230 - blaI penicillinase repressor BlaI core AMR AMR BETA-LACTAM BETA-LACTAM EXACTX 126 126 100.0 100.0 126 WP_001284656.1 penicillinase repressor BlaI SRR13968423_contigs SRR13968423_contigs.fa nucleotide SRR13968423_contig00003 110223 111977 - blaR1 beta-lactam sensor/signal transducer BlaR1 core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 585 585 100.0 99.83 585 WP_001096376.1 beta-lactam sensor/signal transducer BlaR1 SRR13968423_contigs SRR13968423_contigs.fa nucleotide SRR13968423_contig00003 112084 112926 + blaPC1 BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1 core AMR AMR BETA-LACTAM BETA-LACTAM ALLELEX 281 281 100.0 100.0 281 WP_000733283.1 BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1 SRR13968423_contigs SRR13968423_contigs.fa nucleotide SRR13968423_contig00008 54948 55364 - fosB FosB/FosD family fosfomycin resistance bacillithiol transferase core AMR AMR FOSFOMYCIN FOSFOMYCIN BLASTX 139 139 100.0 99.28 139 WP_000920239.1 FosB/FosD family fosfomycin resistance bacillithiol transferase SRR13968423_contigs SRR13968423_contigs.fa nucleotide SRR13968423_contig00013 38315 39577 - murA_D278E Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13968423_contigs SRR13968423_contigs.fa nucleotide SRR13968423_contig00013 38315 39577 - murA_E291D Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13968423_contigs SRR13968423_contigs.fa nucleotide SRR13968423_contig00027 1406 2134 + erm(A) 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A) core AMR AMR LINCOSAMIDE/MACROLIDE AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN EXACTX 243 243 100.0 100.0 243 WP_001072201.1 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A) SRR13968423_contigs SRR13968423_contigs.fa nucleotide SRR13968423_contig00027 2266 3045 - ant(9)-Ia aminoglycoside nucleotidyltransferase ANT(9)-Ia core AMR AMR AMINOGLYCOSIDE SPECTINOMYCIN EXACTX 260 260 100.0 100.0 260 WP_000067268.1 aminoglycoside nucleotidyltransferase ANT(9)-Ia SRR13966959_contigs SRR13966959_contigs.fa nucleotide SRR13966959_contig00001 134502 135857 + glpT_A100V Staphylococcus aureus fosfomycin resistant GlpT core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 452 452 100.0 99.56 452 WP_001010111.1 glycerol-3-phosphate transporter GlpT SRR13966959_contigs SRR13966959_contigs.fa nucleotide SRR13966959_contig00001 134502 135857 + glpT_V213I Staphylococcus aureus fosfomycin resistant GlpT core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 452 452 100.0 99.56 452 WP_001010111.1 glycerol-3-phosphate transporter GlpT SRR13966959_contigs SRR13966959_contigs.fa nucleotide SRR13966959_contig00001 360198 361547 - tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100293.1 tetracycline efflux MFS transporter Tet(38) SRR13966959_contigs SRR13966959_contigs.fa nucleotide SRR13966959_contig00009 95035 95451 + fosB FosB/FosD family fosfomycin resistance bacillithiol transferase core AMR AMR FOSFOMYCIN FOSFOMYCIN BLASTX 139 139 100.0 99.28 139 WP_000920239.1 FosB/FosD family fosfomycin resistance bacillithiol transferase SRR13966959_contigs SRR13966959_contigs.fa nucleotide SRR13966959_contig00010 78016 78858 - blaPC1 BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1 core AMR AMR BETA-LACTAM BETA-LACTAM ALLELEX 281 281 100.0 100.0 281 WP_000733283.1 BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1 SRR13966959_contigs SRR13966959_contigs.fa nucleotide SRR13966959_contig00010 78965 80719 + blaR1 beta-lactam sensor/signal transducer BlaR1 core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 585 585 100.0 99.83 585 WP_001096376.1 beta-lactam sensor/signal transducer BlaR1 SRR13966959_contigs SRR13966959_contigs.fa nucleotide SRR13966959_contig00010 80712 81089 + blaI penicillinase repressor BlaI core AMR AMR BETA-LACTAM BETA-LACTAM EXACTX 126 126 100.0 100.0 126 WP_001284656.1 penicillinase repressor BlaI SRR13966959_contigs SRR13966959_contigs.fa nucleotide SRR13966959_contig00013 36844 38106 + murA_D278E Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13966959_contigs SRR13966959_contigs.fa nucleotide SRR13966959_contig00013 36844 38106 + murA_E291D Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13967372_contigs SRR13967372_contigs.fa nucleotide SRR13967372_contig00001 153566 153982 + fosB FosB/FosD family fosfomycin resistance bacillithiol transferase core AMR AMR FOSFOMYCIN FOSFOMYCIN EXACTX 139 139 100.0 100.0 139 WP_000920239.1 FosB/FosD family fosfomycin resistance bacillithiol transferase SRR13967372_contigs SRR13967372_contigs.fa nucleotide SRR13967372_contig00001 669245 670594 + tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100299.1 tetracycline efflux MFS transporter Tet(38) SRR13968056_contigs SRR13968056_contigs.fa nucleotide SRR13968056_contig00001 665598 666947 + tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100300.1 tetracycline efflux MFS transporter Tet(38) SRR13968056_contigs SRR13968056_contigs.fa nucleotide SRR13968056_contig00009 11378 11755 - blaI penicillinase repressor BlaI core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 126 126 100.0 99.21 126 WP_001284656.1 penicillinase repressor BlaI SRR13968056_contigs SRR13968056_contigs.fa nucleotide SRR13968056_contig00009 11748 13502 - blaR1 beta-lactam sensor/signal transducer BlaR1 core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 585 585 100.0 95.56 585 WP_001096386.1 beta-lactam sensor/signal transducer BlaR1 SRR13968056_contigs SRR13968056_contigs.fa nucleotide SRR13968056_contig00009 13609 14451 + blaZ penicillin-hydrolyzing class A beta-lactamase BlaZ core AMR AMR BETA-LACTAM BETA-LACTAM EXACTX 281 281 100.0 100.0 281 WP_000733289.1 penicillin-hydrolyzing class A beta-lactamase BlaZ SRR13967725_contigs SRR13967725_contigs.fa nucleotide SRR13967725_contig00001 130250 131605 + glpT_A100V Staphylococcus aureus fosfomycin resistant GlpT core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 452 452 100.0 99.34 452 WP_001010111.1 glycerol-3-phosphate transporter GlpT SRR13967725_contigs SRR13967725_contigs.fa nucleotide SRR13967725_contig00001 130250 131605 + glpT_V213I Staphylococcus aureus fosfomycin resistant GlpT core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 452 452 100.0 99.34 452 WP_001010111.1 glycerol-3-phosphate transporter GlpT SRR13967725_contigs SRR13967725_contigs.fa nucleotide SRR13967725_contig00001 355451 356800 - tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100293.1 tetracycline efflux MFS transporter Tet(38) SRR13967725_contigs SRR13967725_contigs.fa nucleotide SRR13967725_contig00002 72098 72940 - blaPC1 BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1 core AMR AMR BETA-LACTAM BETA-LACTAM ALLELEX 281 281 100.0 100.0 281 WP_000733283.1 BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1 SRR13967725_contigs SRR13967725_contigs.fa nucleotide SRR13967725_contig00002 73047 74801 + blaR1 beta-lactam sensor/signal transducer BlaR1 core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 585 585 100.0 99.83 585 WP_001096376.1 beta-lactam sensor/signal transducer BlaR1 SRR13967725_contigs SRR13967725_contigs.fa nucleotide SRR13967725_contig00002 74794 75171 + blaI penicillinase repressor BlaI core AMR AMR BETA-LACTAM BETA-LACTAM EXACTX 126 126 100.0 100.0 126 WP_001284656.1 penicillinase repressor BlaI SRR13967725_contigs SRR13967725_contigs.fa nucleotide SRR13967725_contig00013 38314 39576 - murA_D278E Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13967725_contigs SRR13967725_contigs.fa nucleotide SRR13967725_contig00013 38314 39576 - murA_E291D Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13967725_contigs SRR13967725_contigs.fa nucleotide SRR13967725_contig00014 7668 8084 + fosB FosB/FosD family fosfomycin resistance bacillithiol transferase core AMR AMR FOSFOMYCIN FOSFOMYCIN BLASTX 139 139 100.0 99.28 139 WP_000920239.1 FosB/FosD family fosfomycin resistance bacillithiol transferase SRR13968425_contigs SRR13968425_contigs.fa nucleotide SRR13968425_contig00001 304235 305584 - tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE BLASTX 450 450 100.0 99.78 450 WP_001100293.1 tetracycline efflux MFS transporter Tet(38) SRR13968425_contigs SRR13968425_contigs.fa nucleotide SRR13968425_contig00005 145696 146112 + fosB FosB/FosD family fosfomycin resistance bacillithiol transferase core AMR AMR FOSFOMYCIN FOSFOMYCIN BLASTX 139 139 100.0 99.28 139 WP_000920239.1 FosB/FosD family fosfomycin resistance bacillithiol transferase SRR13966922_contigs SRR13966922_contigs.fa nucleotide SRR13966922_contig00001 347060 348409 + tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100300.1 tetracycline efflux MFS transporter Tet(38) SRR13966922_contigs SRR13966922_contigs.fa nucleotide SRR13966922_contig00004 133221 133637 + fosB FosB/FosD family fosfomycin resistance bacillithiol transferase core AMR AMR FOSFOMYCIN FOSFOMYCIN BLASTX 139 139 100.0 99.28 139 WP_000920239.1 FosB/FosD family fosfomycin resistance bacillithiol transferase SRR13966922_contigs SRR13966922_contigs.fa nucleotide SRR13966922_contig00006 37202 38464 - murA_G257D Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13968298_contigs SRR13968298_contigs.fa nucleotide SRR13968298_contig00002 303549 304898 - tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE BLASTX 450 450 100.0 99.78 450 WP_001100293.1 tetracycline efflux MFS transporter Tet(38) SRR13968298_contigs SRR13968298_contigs.fa nucleotide SRR13968298_contig00004 74431 74847 + fosB FosB/FosD family fosfomycin resistance bacillithiol transferase core AMR AMR FOSFOMYCIN FOSFOMYCIN BLASTX 139 139 100.0 99.28 139 WP_000920239.1 FosB/FosD family fosfomycin resistance bacillithiol transferase SRR13968298_contigs SRR13968298_contigs.fa nucleotide SRR13968298_contig00021 2373 3938 - vga(A) ABC-F type ribosomal protection protein Vga(A) core AMR AMR LINCOSAMIDE LINCOSAMIDE EXACTX 522 522 100.0 100.0 522 WP_002440627.1 ABC-F type ribosomal protection protein Vga(A) SRR13967722_contigs SRR13967722_contigs.fa nucleotide SRR13967722_contig00005 226 642 + fosB FosB/FosD family fosfomycin resistance bacillithiol transferase core AMR AMR FOSFOMYCIN FOSFOMYCIN BLASTX 139 139 100.0 98.56 139 WP_000920239.1 FosB/FosD family fosfomycin resistance bacillithiol transferase SRR13967722_contigs SRR13967722_contigs.fa nucleotide SRR13967722_contig00009 28798 30147 + tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100293.1 tetracycline efflux MFS transporter Tet(38) SRR13967722_contigs SRR13967722_contigs.fa nucleotide SRR13967722_contig00027 11311 11688 - blaI penicillinase repressor BlaI core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 126 126 100.0 99.21 126 WP_001284656.1 penicillinase repressor BlaI SRR13967722_contigs SRR13967722_contigs.fa nucleotide SRR13967722_contig00027 11681 13435 - blaR1 beta-lactam sensor/signal transducer BlaR1 core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 585 585 100.0 95.56 585 WP_001096386.1 beta-lactam sensor/signal transducer BlaR1 SRR13967722_contigs SRR13967722_contigs.fa nucleotide SRR13967722_contig00027 13542 14384 + blaZ penicillin-hydrolyzing class A beta-lactamase BlaZ core AMR AMR BETA-LACTAM BETA-LACTAM EXACTX 281 281 100.0 100.0 281 WP_000733289.1 penicillin-hydrolyzing class A beta-lactamase BlaZ SRR13966988_contigs SRR13966988_contigs.fa nucleotide SRR13966988_contig00001 363303 363680 - blaI penicillinase repressor BlaI core AMR AMR BETA-LACTAM BETA-LACTAM EXACTX 126 126 100.0 100.0 126 WP_001284656.1 penicillinase repressor BlaI SRR13966988_contigs SRR13966988_contigs.fa nucleotide SRR13966988_contig00001 363673 365427 - blaR1 beta-lactam sensor/signal transducer BlaR1 core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 585 585 100.0 99.83 585 WP_001096376.1 beta-lactam sensor/signal transducer BlaR1 SRR13966988_contigs SRR13966988_contigs.fa nucleotide SRR13966988_contig00001 365534 366376 + blaPC1 BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1 core AMR AMR BETA-LACTAM BETA-LACTAM ALLELEX 281 281 100.0 100.0 281 WP_000733283.1 BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1 SRR13966988_contigs SRR13966988_contigs.fa nucleotide SRR13966988_contig00002 60540 61889 + tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100293.1 tetracycline efflux MFS transporter Tet(38) SRR13966988_contigs SRR13966988_contigs.fa nucleotide SRR13966988_contig00002 286232 287587 - glpT_A100V Staphylococcus aureus fosfomycin resistant GlpT core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 452 452 100.0 99.56 452 WP_001010111.1 glycerol-3-phosphate transporter GlpT SRR13966988_contigs SRR13966988_contigs.fa nucleotide SRR13966988_contig00002 286232 287587 - glpT_V213I Staphylococcus aureus fosfomycin resistant GlpT core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 452 452 100.0 99.56 452 WP_001010111.1 glycerol-3-phosphate transporter GlpT SRR13966988_contigs SRR13966988_contigs.fa nucleotide SRR13966988_contig00007 95155 95571 + fosB FosB/FosD family fosfomycin resistance bacillithiol transferase core AMR AMR FOSFOMYCIN FOSFOMYCIN BLASTX 139 139 100.0 99.28 139 WP_000920239.1 FosB/FosD family fosfomycin resistance bacillithiol transferase SRR13966988_contigs SRR13966988_contigs.fa nucleotide SRR13966988_contig00013 38315 39577 - murA_D278E Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13966988_contigs SRR13966988_contigs.fa nucleotide SRR13966988_contig00013 38315 39577 - murA_E291D Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13968074_contigs SRR13968074_contigs.fa nucleotide SRR13968074_contig00001 48851 51250 + parC_S80F Staphylococcus aureus quinolone resistant ParC core AMR POINT QUINOLONE QUINOLONE POINTX 800 800 100.0 99.12 800 WP_001289586.1 DNA topoisomerase IV subunit A ParC SRR13968074_contigs SRR13968074_contigs.fa nucleotide SRR13968074_contig00001 138425 138901 - dfrB_A135T Staphylococcus aureus trimethoprim resistant DfrB core AMR POINT TRIMETHOPRIM TRIMETHOPRIM POINTX 159 159 100.0 98.11 159 WP_000175752.1 dihydrofolate reductase DfrB SRR13968074_contigs SRR13968074_contigs.fa nucleotide SRR13968074_contig00007 68974 69351 - blaI penicillinase repressor BlaI core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 126 126 100.0 96.03 126 WP_001284656.1 penicillinase repressor BlaI SRR13968074_contigs SRR13968074_contigs.fa nucleotide SRR13968074_contig00007 71205 72047 + blaZ penicillin-hydrolyzing class A beta-lactamase BlaZ core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 281 281 100.0 94.66 281 WP_000733281.1 penicillin-hydrolyzing class A beta-lactamase BlaZ SRR13968074_contigs SRR13968074_contigs.fa nucleotide SRR13968074_contig00015 48851 51511 - gyrA_S84L Staphylococcus aureus quinolone resistant GyrA core AMR POINT QUINOLONE QUINOLONE POINTX 887 887 100.0 99.77 887 WP_000819084.1 DNA gyrase subunit A GyrA SRR13968074_contigs SRR13968074_contigs.fa nucleotide SRR13968074_contig00017 9111 10460 - tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100293.1 tetracycline efflux MFS transporter Tet(38) SRR13968074_contigs SRR13968074_contigs.fa nucleotide SRR13968074_contig00027 2071 2391 + qacC quaternary ammonium compound efflux SMR transporter QacC core STRESS BIOCIDE QUATERNARY AMMONIUM QUATERNARY AMMONIUM EXACTX 107 107 100.0 100.0 107 WP_001146389.1 quaternary ammonium compound efflux SMR transporter QacC SRR13966919_contigs SRR13966919_contigs.fa nucleotide SRR13966919_contig00001 354080 355429 - tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100293.1 tetracycline efflux MFS transporter Tet(38) SRR13966919_contigs SRR13966919_contigs.fa nucleotide SRR13966919_contig00003 148057 148473 + fosB FosB/FosD family fosfomycin resistance bacillithiol transferase core AMR AMR FOSFOMYCIN FOSFOMYCIN BLASTX 139 139 100.0 98.56 139 WP_000920239.1 FosB/FosD family fosfomycin resistance bacillithiol transferase SRR13966919_contigs SRR13966919_contigs.fa nucleotide SRR13966919_contig00018 11378 11755 - blaI penicillinase repressor BlaI core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 126 126 100.0 99.21 126 WP_001284656.1 penicillinase repressor BlaI SRR13966919_contigs SRR13966919_contigs.fa nucleotide SRR13966919_contig00018 11748 13502 - blaR1 beta-lactam sensor/signal transducer BlaR1 core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 585 585 100.0 95.56 585 WP_001096386.1 beta-lactam sensor/signal transducer BlaR1 SRR13966919_contigs SRR13966919_contigs.fa nucleotide SRR13966919_contig00018 13609 14451 + blaZ penicillin-hydrolyzing class A beta-lactamase BlaZ core AMR AMR BETA-LACTAM BETA-LACTAM EXACTX 281 281 100.0 100.0 281 WP_000733289.1 penicillin-hydrolyzing class A beta-lactamase BlaZ SRR13967168_contigs SRR13967168_contigs.fa nucleotide SRR13967168_contig00001 215959 218358 + parC_S80F Staphylococcus aureus quinolone resistant ParC core AMR POINT QUINOLONE QUINOLONE POINTX 800 800 100.0 99.38 800 WP_001289586.1 DNA topoisomerase IV subunit A ParC SRR13967168_contigs SRR13967168_contigs.fa nucleotide SRR13967168_contig00001 541433 542161 + erm(A) 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A) core AMR AMR LINCOSAMIDE/MACROLIDE AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN BLASTX 243 243 100.0 99.59 243 WP_001072201.1 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A) SRR13967168_contigs SRR13967168_contigs.fa nucleotide SRR13967168_contig00001 542293 543072 - ant(9)-Ia aminoglycoside nucleotidyltransferase ANT(9)-Ia core AMR AMR AMINOGLYCOSIDE SPECTINOMYCIN EXACTX 260 260 100.0 100.0 260 WP_000067268.1 aminoglycoside nucleotidyltransferase ANT(9)-Ia SRR13967168_contigs SRR13967168_contigs.fa nucleotide SRR13967168_contig00002 284516 286519 - mecA PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA core AMR AMR BETA-LACTAM METHICILLIN BLASTX 668 668 100.0 99.85 668 WP_000721310.1 PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA SRR13967168_contigs SRR13967168_contigs.fa nucleotide SRR13967168_contig00002 286619 287593 + mecR1 beta-lactam sensor/signal transducer MecR1 core AMR AMR BETA-LACTAM METHICILLIN PARTIALX 325 585 55.56 100.0 325 WP_000952923.1 beta-lactam sensor/signal transducer MecR1 SRR13967168_contigs SRR13967168_contigs.fa nucleotide SRR13967168_contig00002 371045 372394 + tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100299.1 tetracycline efflux MFS transporter Tet(38) SRR13967168_contigs SRR13967168_contigs.fa nucleotide SRR13967168_contig00004 155097 155513 + fosB FosB/FosD family fosfomycin resistance bacillithiol transferase core AMR AMR FOSFOMYCIN FOSFOMYCIN EXACTX 139 139 100.0 100.0 139 WP_000920239.1 FosB/FosD family fosfomycin resistance bacillithiol transferase SRR13967168_contigs SRR13967168_contigs.fa nucleotide SRR13967168_contig00012 32965 35043 + fusA_V90I Staphylococcus aureus fusidic acid resistant FusA core AMR POINT FUSIDIC_ACID FUSIDIC_ACID POINTX 693 693 100.0 99.86 693 WP_000090315.1 elongation factor G FusA SRR13967168_contigs SRR13967168_contigs.fa nucleotide SRR13967168_contig00013 7257 7634 - blaI penicillinase repressor BlaI core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 126 126 100.0 99.21 126 WP_001284656.1 penicillinase repressor BlaI SRR13967168_contigs SRR13967168_contigs.fa nucleotide SRR13967168_contig00013 7627 9381 - blaR1 beta-lactam sensor/signal transducer BlaR1 core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 585 585 100.0 95.04 585 WP_001096376.1 beta-lactam sensor/signal transducer BlaR1 SRR13967168_contigs SRR13967168_contigs.fa nucleotide SRR13967168_contig00013 9488 10330 + blaZ penicillin-hydrolyzing class A beta-lactamase BlaZ core AMR AMR BETA-LACTAM BETA-LACTAM EXACTX 281 281 100.0 100.0 281 WP_000733281.1 penicillin-hydrolyzing class A beta-lactamase BlaZ SRR13968390_contigs SRR13968390_contigs.fa nucleotide SRR13968390_contig00001 123932 124408 - dfrB_A135T Staphylococcus aureus trimethoprim resistant DfrB core AMR POINT TRIMETHOPRIM TRIMETHOPRIM POINTX 159 159 100.0 98.11 159 WP_000175752.1 dihydrofolate reductase DfrB SRR13968390_contigs SRR13968390_contigs.fa nucleotide SRR13968390_contig00018 44102 45451 + tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100293.1 tetracycline efflux MFS transporter Tet(38) SRR13967676_contigs SRR13967676_contigs.fa nucleotide SRR13967676_contig00002 170968 172317 - tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100293.1 tetracycline efflux MFS transporter Tet(38) SRR13967676_contigs SRR13967676_contigs.fa nucleotide SRR13967676_contig00003 116808 117557 - blaZ penicillin-hydrolyzing class A beta-lactamase BlaZ core AMR AMR BETA-LACTAM BETA-LACTAM PARTIALX 250 281 88.97 100.0 250 WP_000733283.1 BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1 SRR13967676_contigs SRR13967676_contigs.fa nucleotide SRR13967676_contig00003 118190 119509 + blaR1 beta-lactam sensor/signal transducer BlaR1 core AMR AMR BETA-LACTAM BETA-LACTAM INTERNAL_STOP 440 585 75.56 97.96 442 WP_001096376.1 beta-lactam sensor/signal transducer BlaR1 SRR13967676_contigs SRR13967676_contigs.fa nucleotide SRR13967676_contig00003 119502 119879 + blaI penicillinase repressor BlaI core AMR AMR BETA-LACTAM BETA-LACTAM EXACTX 126 126 100.0 100.0 126 WP_001284656.1 penicillinase repressor BlaI SRR13967676_contigs SRR13967676_contigs.fa nucleotide SRR13967676_contig00004 54045 55400 - glpT_A100V Staphylococcus aureus fosfomycin resistant GlpT core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 452 452 100.0 99.56 452 WP_001010111.1 glycerol-3-phosphate transporter GlpT SRR13967676_contigs SRR13967676_contigs.fa nucleotide SRR13967676_contig00004 54045 55400 - glpT_V213I Staphylococcus aureus fosfomycin resistant GlpT core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 452 452 100.0 99.56 452 WP_001010111.1 glycerol-3-phosphate transporter GlpT SRR13967676_contigs SRR13967676_contigs.fa nucleotide SRR13967676_contig00013 45557 46819 + murA_D278E Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13967676_contigs SRR13967676_contigs.fa nucleotide SRR13967676_contig00013 45557 46819 + murA_E291D Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13967676_contigs SRR13967676_contigs.fa nucleotide SRR13967676_contig00015 54932 55348 - fosB FosB/FosD family fosfomycin resistance bacillithiol transferase core AMR AMR FOSFOMYCIN FOSFOMYCIN BLASTX 139 139 100.0 99.28 139 WP_000920239.1 FosB/FosD family fosfomycin resistance bacillithiol transferase SRR13967676_contigs SRR13967676_contigs.fa nucleotide SRR13967676_contig00031 1301 2029 + erm(A) 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A) core AMR AMR LINCOSAMIDE/MACROLIDE AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN EXACTX 243 243 100.0 100.0 243 WP_001072201.1 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A) SRR13967676_contigs SRR13967676_contigs.fa nucleotide SRR13967676_contig00031 2161 2940 - ant(9)-Ia aminoglycoside nucleotidyltransferase ANT(9)-Ia core AMR AMR AMINOGLYCOSIDE SPECTINOMYCIN EXACTX 260 260 100.0 100.0 260 WP_000067268.1 aminoglycoside nucleotidyltransferase ANT(9)-Ia SRR13966828_contigs SRR13966828_contigs.fa nucleotide SRR13966828_contig00002 60516 61865 + tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100293.1 tetracycline efflux MFS transporter Tet(38) SRR13966828_contigs SRR13966828_contigs.fa nucleotide SRR13966828_contig00007 7191 8546 - glpT_A100V Staphylococcus aureus fosfomycin resistant GlpT core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 452 452 100.0 99.56 452 WP_001010111.1 glycerol-3-phosphate transporter GlpT SRR13966828_contigs SRR13966828_contigs.fa nucleotide SRR13966828_contig00007 7191 8546 - glpT_V213I Staphylococcus aureus fosfomycin resistant GlpT core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 452 452 100.0 99.56 452 WP_001010111.1 glycerol-3-phosphate transporter GlpT SRR13966828_contigs SRR13966828_contigs.fa nucleotide SRR13966828_contig00008 121664 122506 - blaPC1 BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1 core AMR AMR BETA-LACTAM BETA-LACTAM ALLELEX 281 281 100.0 100.0 281 WP_000733283.1 BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1 SRR13966828_contigs SRR13966828_contigs.fa nucleotide SRR13966828_contig00008 122613 124367 + blaR1 beta-lactam sensor/signal transducer BlaR1 core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 585 585 100.0 99.83 585 WP_001096376.1 beta-lactam sensor/signal transducer BlaR1 SRR13966828_contigs SRR13966828_contigs.fa nucleotide SRR13966828_contig00008 124360 124737 + blaI penicillinase repressor BlaI core AMR AMR BETA-LACTAM BETA-LACTAM EXACTX 126 126 100.0 100.0 126 WP_001284656.1 penicillinase repressor BlaI SRR13966828_contigs SRR13966828_contigs.fa nucleotide SRR13966828_contig00012 54970 55386 - fosB FosB/FosD family fosfomycin resistance bacillithiol transferase core AMR AMR FOSFOMYCIN FOSFOMYCIN BLASTX 139 139 100.0 99.28 139 WP_000920239.1 FosB/FosD family fosfomycin resistance bacillithiol transferase SRR13966828_contigs SRR13966828_contigs.fa nucleotide SRR13966828_contig00013 38315 39577 - murA_D278E Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13966828_contigs SRR13966828_contigs.fa nucleotide SRR13966828_contig00013 38315 39577 - murA_E291D Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13968030_contigs SRR13968030_contigs.fa nucleotide SRR13968030_contig00004 121283 122638 - glpT_A100V Staphylococcus aureus fosfomycin resistant GlpT core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 452 452 100.0 99.56 452 WP_001010111.1 glycerol-3-phosphate transporter GlpT SRR13968030_contigs SRR13968030_contigs.fa nucleotide SRR13968030_contig00006 29166 30515 + tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100293.1 tetracycline efflux MFS transporter Tet(38) SRR13968030_contigs SRR13968030_contigs.fa nucleotide SRR13968030_contig00008 68122 69384 + murA_E291D Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13968030_contigs SRR13968030_contigs.fa nucleotide SRR13968030_contig00008 68122 69384 + murA_T396N Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13968030_contigs SRR13968030_contigs.fa nucleotide SRR13968030_contig00015 11366 11743 - blaI penicillinase repressor BlaI core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 126 126 100.0 99.21 126 WP_001284656.1 penicillinase repressor BlaI SRR13968030_contigs SRR13968030_contigs.fa nucleotide SRR13968030_contig00015 11736 13490 - blaR1 beta-lactam sensor/signal transducer BlaR1 core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 585 585 100.0 95.56 585 WP_001096386.1 beta-lactam sensor/signal transducer BlaR1 SRR13968030_contigs SRR13968030_contigs.fa nucleotide SRR13968030_contig00015 13597 14439 + blaZ penicillin-hydrolyzing class A beta-lactamase BlaZ core AMR AMR BETA-LACTAM BETA-LACTAM EXACTX 281 281 100.0 100.0 281 WP_000733289.1 penicillin-hydrolyzing class A beta-lactamase BlaZ SRR13968761_contigs SRR13968761_contigs.fa nucleotide SRR13968761_contig00001 545544 546272 + erm(A) 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A) core AMR AMR LINCOSAMIDE/MACROLIDE AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN BLASTX 243 243 100.0 99.59 243 WP_001072201.1 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A) SRR13968761_contigs SRR13968761_contigs.fa nucleotide SRR13968761_contig00001 546404 547183 - ant(9)-Ia aminoglycoside nucleotidyltransferase ANT(9)-Ia core AMR AMR AMINOGLYCOSIDE SPECTINOMYCIN EXACTX 260 260 100.0 100.0 260 WP_000067268.1 aminoglycoside nucleotidyltransferase ANT(9)-Ia SRR13968761_contigs SRR13968761_contigs.fa nucleotide SRR13968761_contig00002 311969 313318 - tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100299.1 tetracycline efflux MFS transporter Tet(38) SRR13968761_contigs SRR13968761_contigs.fa nucleotide SRR13968761_contig00004 171200 171616 - fosB FosB/FosD family fosfomycin resistance bacillithiol transferase core AMR AMR FOSFOMYCIN FOSFOMYCIN EXACTX 139 139 100.0 100.0 139 WP_000920239.1 FosB/FosD family fosfomycin resistance bacillithiol transferase SRR13968761_contigs SRR13968761_contigs.fa nucleotide SRR13968761_contig00012 2223 3065 - blaZ penicillin-hydrolyzing class A beta-lactamase BlaZ core AMR AMR BETA-LACTAM BETA-LACTAM EXACTX 281 281 100.0 100.0 281 WP_000733281.1 penicillin-hydrolyzing class A beta-lactamase BlaZ SRR13968761_contigs SRR13968761_contigs.fa nucleotide SRR13968761_contig00012 3172 4926 + blaR1 beta-lactam sensor/signal transducer BlaR1 core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 585 585 100.0 95.04 585 WP_001096376.1 beta-lactam sensor/signal transducer BlaR1 SRR13968761_contigs SRR13968761_contigs.fa nucleotide SRR13968761_contig00012 4919 5296 + blaI penicillinase repressor BlaI core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 126 126 100.0 99.21 126 WP_001284656.1 penicillinase repressor BlaI SRR13966864_contigs SRR13966864_contigs.fa nucleotide SRR13966864_contig00002 132320 132736 + fosB FosB/FosD family fosfomycin resistance bacillithiol transferase core AMR AMR FOSFOMYCIN FOSFOMYCIN EXACTX 139 139 100.0 100.0 139 WP_000920239.1 FosB/FosD family fosfomycin resistance bacillithiol transferase SRR13966864_contigs SRR13966864_contigs.fa nucleotide SRR13966864_contig00005 192752 194101 + tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100299.1 tetracycline efflux MFS transporter Tet(38) SRR13967532_contigs SRR13967532_contigs.fa nucleotide SRR13967532_contig00002 342529 343878 + tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100299.1 tetracycline efflux MFS transporter Tet(38) SRR13967532_contigs SRR13967532_contigs.fa nucleotide SRR13967532_contig00004 153523 153939 + fosB FosB/FosD family fosfomycin resistance bacillithiol transferase core AMR AMR FOSFOMYCIN FOSFOMYCIN EXACTX 139 139 100.0 100.0 139 WP_000920239.1 FosB/FosD family fosfomycin resistance bacillithiol transferase SRR13968490_contigs SRR13968490_contigs.fa nucleotide SRR13968490_contig00009 35577 36926 - tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100293.1 tetracycline efflux MFS transporter Tet(38) SRR13968490_contigs SRR13968490_contigs.fa nucleotide SRR13968490_contig00021 51057 51473 - fosB FosB/FosD family fosfomycin resistance bacillithiol transferase core AMR AMR FOSFOMYCIN FOSFOMYCIN BLASTX 139 139 100.0 98.56 139 WP_000920239.1 FosB/FosD family fosfomycin resistance bacillithiol transferase SRR13968490_contigs SRR13968490_contigs.fa nucleotide SRR13968490_contig00031 11324 11701 - blaI penicillinase repressor BlaI core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 126 126 100.0 99.21 126 WP_001284656.1 penicillinase repressor BlaI SRR13968490_contigs SRR13968490_contigs.fa nucleotide SRR13968490_contig00031 11694 13448 - blaR1 beta-lactam sensor/signal transducer BlaR1 core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 585 585 100.0 95.56 585 WP_001096386.1 beta-lactam sensor/signal transducer BlaR1 SRR13968490_contigs SRR13968490_contigs.fa nucleotide SRR13968490_contig00031 13555 14397 + blaZ penicillin-hydrolyzing class A beta-lactamase BlaZ core AMR AMR BETA-LACTAM BETA-LACTAM EXACTX 281 281 100.0 100.0 281 WP_000733289.1 penicillin-hydrolyzing class A beta-lactamase BlaZ SRR13967721_contigs SRR13967721_contigs.fa nucleotide SRR13967721_contig00009 296 712 + fosB FosB/FosD family fosfomycin resistance bacillithiol transferase core AMR AMR FOSFOMYCIN FOSFOMYCIN BLASTX 139 139 100.0 99.28 139 WP_000920239.1 FosB/FosD family fosfomycin resistance bacillithiol transferase SRR13967721_contigs SRR13967721_contigs.fa nucleotide SRR13967721_contig00021 31059 32408 + tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE BLASTX 450 450 100.0 99.78 450 WP_001100293.1 tetracycline efflux MFS transporter Tet(38) SRR13967721_contigs SRR13967721_contigs.fa nucleotide SRR13967721_contig00022 13343 13720 - blaI penicillinase repressor BlaI core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 126 126 100.0 99.21 126 WP_001284656.1 penicillinase repressor BlaI SRR13967721_contigs SRR13967721_contigs.fa nucleotide SRR13967721_contig00022 13713 15032 - blaR1 beta-lactam sensor/signal transducer BlaR1 core AMR AMR BETA-LACTAM BETA-LACTAM INTERNAL_STOP 440 585 75.56 97.96 442 WP_001096386.1 beta-lactam sensor/signal transducer BlaR1 SRR13967721_contigs SRR13967721_contigs.fa nucleotide SRR13967721_contig00022 15573 16415 + blaZ penicillin-hydrolyzing class A beta-lactamase BlaZ core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 281 281 100.0 98.58 281 WP_000733274.1 penicillin-hydrolyzing class A beta-lactamase BlaZ SRR13967649_contigs SRR13967649_contigs.fa nucleotide SRR13967649_contig00001 94987 95403 + fosB FosB/FosD family fosfomycin resistance bacillithiol transferase core AMR AMR FOSFOMYCIN FOSFOMYCIN BLASTX 139 139 100.0 98.56 139 WP_000920239.1 FosB/FosD family fosfomycin resistance bacillithiol transferase SRR13967649_contigs SRR13967649_contigs.fa nucleotide SRR13967649_contig00002 37450 38805 + glpT_A100V Staphylococcus aureus fosfomycin resistant GlpT core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 452 452 100.0 99.56 452 WP_001010111.1 glycerol-3-phosphate transporter GlpT SRR13967649_contigs SRR13967649_contigs.fa nucleotide SRR13967649_contig00002 37450 38805 + glpT_L27F Staphylococcus aureus fosfomycin resistant GlpT core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 452 452 100.0 99.56 452 WP_001010111.1 glycerol-3-phosphate transporter GlpT SRR13967649_contigs SRR13967649_contigs.fa nucleotide SRR13967649_contig00002 264288 265637 - tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100293.1 tetracycline efflux MFS transporter Tet(38) SRR13967649_contigs SRR13967649_contigs.fa nucleotide SRR13967649_contig00006 46624 47466 - blaZ penicillin-hydrolyzing class A beta-lactamase BlaZ core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 281 281 100.0 94.66 281 WP_000733281.1 penicillin-hydrolyzing class A beta-lactamase BlaZ SRR13967649_contigs SRR13967649_contigs.fa nucleotide SRR13967649_contig00006 49320 49697 + blaI penicillinase repressor BlaI core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 126 126 100.0 96.03 126 WP_001284656.1 penicillinase repressor BlaI SRR13967649_contigs SRR13967649_contigs.fa nucleotide SRR13967649_contig00009 17231 18493 - murA_E291D Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13967649_contigs SRR13967649_contigs.fa nucleotide SRR13967649_contig00009 17231 18493 - murA_T396N Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13967649_contigs SRR13967649_contigs.fa nucleotide SRR13967649_contig00013 52225 52863 + fusB fusidic acid resistance EF-G-binding protein FusB core AMR AMR FUSIDIC ACID FUSIDIC ACID EXACTX 213 213 100.0 100.0 213 WP_000855537.1 fusidic acid resistance EF-G-binding protein FusB SRR13967101_contigs SRR13967101_contigs.fa nucleotide SRR13967101_contig00005 119770 121125 + glpT_A100V Staphylococcus aureus fosfomycin resistant GlpT core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 452 452 100.0 99.56 452 WP_001010111.1 glycerol-3-phosphate transporter GlpT SRR13967101_contigs SRR13967101_contigs.fa nucleotide SRR13967101_contig00005 119770 121125 + glpT_F3I Staphylococcus aureus fosfomycin resistant GlpT core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 452 452 100.0 99.56 452 WP_001010111.1 glycerol-3-phosphate transporter GlpT SRR13967101_contigs SRR13967101_contigs.fa nucleotide SRR13967101_contig00009 41980 43329 + tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100293.1 tetracycline efflux MFS transporter Tet(38) SRR13967101_contigs SRR13967101_contigs.fa nucleotide SRR13967101_contig00012 27876 29954 - fusA_M453I Staphylococcus aureus fusidic acid resistant FusA core AMR POINT FUSIDIC_ACID FUSIDIC_ACID POINTX 693 693 100.0 99.71 693 WP_000090315.1 elongation factor G FusA SRR13967101_contigs SRR13967101_contigs.fa nucleotide SRR13967101_contig00022 11368 11745 - blaI penicillinase repressor BlaI core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 126 126 100.0 99.21 126 WP_001284656.1 penicillinase repressor BlaI SRR13967101_contigs SRR13967101_contigs.fa nucleotide SRR13967101_contig00022 11738 13057 - blaR1 beta-lactam sensor/signal transducer BlaR1 core AMR AMR BETA-LACTAM BETA-LACTAM INTERNAL_STOP 440 585 75.56 93.44 442 WP_001096386.1 beta-lactam sensor/signal transducer BlaR1 SRR13967101_contigs SRR13967101_contigs.fa nucleotide SRR13967101_contig00022 13598 14440 + blaZ penicillin-hydrolyzing class A beta-lactamase BlaZ core AMR AMR BETA-LACTAM BETA-LACTAM EXACTX 281 281 100.0 100.0 281 WP_000733289.1 penicillin-hydrolyzing class A beta-lactamase BlaZ SRR13968018_contigs SRR13968018_contigs.fa nucleotide SRR13968018_contig00001 121850 122692 - blaPC1 BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1 core AMR AMR BETA-LACTAM BETA-LACTAM ALLELEX 281 281 100.0 100.0 281 WP_000733283.1 BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1 SRR13968018_contigs SRR13968018_contigs.fa nucleotide SRR13968018_contig00001 122799 124553 + blaR1 beta-lactam sensor/signal transducer BlaR1 core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 585 585 100.0 99.83 585 WP_001096376.1 beta-lactam sensor/signal transducer BlaR1 SRR13968018_contigs SRR13968018_contigs.fa nucleotide SRR13968018_contig00001 124546 124923 + blaI penicillinase repressor BlaI core AMR AMR BETA-LACTAM BETA-LACTAM EXACTX 126 126 100.0 100.0 126 WP_001284656.1 penicillinase repressor BlaI SRR13968018_contigs SRR13968018_contigs.fa nucleotide SRR13968018_contig00002 134540 135895 + glpT_A100V Staphylococcus aureus fosfomycin resistant GlpT core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 452 452 100.0 99.56 452 WP_001010111.1 glycerol-3-phosphate transporter GlpT SRR13968018_contigs SRR13968018_contigs.fa nucleotide SRR13968018_contig00002 134540 135895 + glpT_V213I Staphylococcus aureus fosfomycin resistant GlpT core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 452 452 100.0 99.56 452 WP_001010111.1 glycerol-3-phosphate transporter GlpT SRR13968018_contigs SRR13968018_contigs.fa nucleotide SRR13968018_contig00002 360252 361601 - tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE BLASTX 450 450 100.0 99.78 450 WP_001100293.1 tetracycline efflux MFS transporter Tet(38) SRR13968018_contigs SRR13968018_contigs.fa nucleotide SRR13968018_contig00006 95084 95500 + fosB FosB/FosD family fosfomycin resistance bacillithiol transferase core AMR AMR FOSFOMYCIN FOSFOMYCIN BLASTX 139 139 100.0 99.28 139 WP_000920239.1 FosB/FosD family fosfomycin resistance bacillithiol transferase SRR13968018_contigs SRR13968018_contigs.fa nucleotide SRR13968018_contig00010 38314 39576 - murA_D278E Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13968018_contigs SRR13968018_contigs.fa nucleotide SRR13968018_contig00010 38314 39576 - murA_E291D Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13967952_contigs SRR13967952_contigs.fa nucleotide SRR13967952_contig00001 204384 205733 + tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100294.1 tetracycline efflux MFS transporter Tet(38) SRR13967952_contigs SRR13967952_contigs.fa nucleotide SRR13967952_contig00023 6391 7233 - blaZ penicillin-hydrolyzing class A beta-lactamase BlaZ core AMR AMR BETA-LACTAM BETA-LACTAM EXACTX 281 281 100.0 100.0 281 WP_000733289.1 penicillin-hydrolyzing class A beta-lactamase BlaZ SRR13967952_contigs SRR13967952_contigs.fa nucleotide SRR13967952_contig00023 7340 9094 + blaR1 beta-lactam sensor/signal transducer BlaR1 core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 585 585 100.0 95.56 585 WP_001096386.1 beta-lactam sensor/signal transducer BlaR1 SRR13967952_contigs SRR13967952_contigs.fa nucleotide SRR13967952_contig00023 9087 9464 + blaI penicillinase repressor BlaI core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 126 126 100.0 99.21 126 WP_001284656.1 penicillinase repressor BlaI SRR13967788_contigs SRR13967788_contigs.fa nucleotide SRR13967788_contig00003 119439 120794 + glpT_A100V Staphylococcus aureus fosfomycin resistant GlpT core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 452 452 100.0 99.56 452 WP_001010111.1 glycerol-3-phosphate transporter GlpT SRR13967788_contigs SRR13967788_contigs.fa nucleotide SRR13967788_contig00003 119439 120794 + glpT_V213I Staphylococcus aureus fosfomycin resistant GlpT core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 452 452 100.0 99.56 452 WP_001010111.1 glycerol-3-phosphate transporter GlpT SRR13967788_contigs SRR13967788_contigs.fa nucleotide SRR13967788_contig00004 67975 68352 - blaI penicillinase repressor BlaI core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 126 126 100.0 96.03 126 WP_001284656.1 penicillinase repressor BlaI SRR13967788_contigs SRR13967788_contigs.fa nucleotide SRR13967788_contig00004 70206 71048 + blaZ penicillin-hydrolyzing class A beta-lactamase BlaZ core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 281 281 100.0 95.02 281 WP_000733281.1 penicillin-hydrolyzing class A beta-lactamase BlaZ SRR13967788_contigs SRR13967788_contigs.fa nucleotide SRR13967788_contig00005 60471 61820 + tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100293.1 tetracycline efflux MFS transporter Tet(38) SRR13967788_contigs SRR13967788_contigs.fa nucleotide SRR13967788_contig00007 20718 21134 - fosB FosB/FosD family fosfomycin resistance bacillithiol transferase core AMR AMR FOSFOMYCIN FOSFOMYCIN BLASTX 139 139 100.0 99.28 139 WP_000920239.1 FosB/FosD family fosfomycin resistance bacillithiol transferase SRR13967788_contigs SRR13967788_contigs.fa nucleotide SRR13967788_contig00012 45557 46819 + murA_D278E Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13967788_contigs SRR13967788_contigs.fa nucleotide SRR13967788_contig00012 45557 46819 + murA_E291D Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13966993_contigs SRR13966993_contigs.fa nucleotide SRR13966993_contig00008 119768 121123 + glpT_A100V Staphylococcus aureus fosfomycin resistant GlpT core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 452 452 100.0 99.56 452 WP_001010111.1 glycerol-3-phosphate transporter GlpT SRR13966993_contigs SRR13966993_contigs.fa nucleotide SRR13966993_contig00008 119768 121123 + glpT_F3I Staphylococcus aureus fosfomycin resistant GlpT core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 452 452 100.0 99.56 452 WP_001010111.1 glycerol-3-phosphate transporter GlpT SRR13966993_contigs SRR13966993_contigs.fa nucleotide SRR13966993_contig00011 103756 105105 + tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100293.1 tetracycline efflux MFS transporter Tet(38) SRR13966993_contigs SRR13966993_contigs.fa nucleotide SRR13966993_contig00024 11368 11745 - blaI penicillinase repressor BlaI core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 126 126 100.0 99.21 126 WP_001284656.1 penicillinase repressor BlaI SRR13966993_contigs SRR13966993_contigs.fa nucleotide SRR13966993_contig00024 11738 13492 - blaR1 beta-lactam sensor/signal transducer BlaR1 core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 585 585 100.0 95.56 585 WP_001096386.1 beta-lactam sensor/signal transducer BlaR1 SRR13966993_contigs SRR13966993_contigs.fa nucleotide SRR13966993_contig00024 13599 14441 + blaZ penicillin-hydrolyzing class A beta-lactamase BlaZ core AMR AMR BETA-LACTAM BETA-LACTAM EXACTX 281 281 100.0 100.0 281 WP_000733289.1 penicillin-hydrolyzing class A beta-lactamase BlaZ SRR13968041_contigs SRR13968041_contigs.fa nucleotide SRR13968041_contig00001 148365 148781 + fosB FosB/FosD family fosfomycin resistance bacillithiol transferase core AMR AMR FOSFOMYCIN FOSFOMYCIN BLASTX 139 139 100.0 98.56 139 WP_000920239.1 FosB/FosD family fosfomycin resistance bacillithiol transferase SRR13968041_contigs SRR13968041_contigs.fa nucleotide SRR13968041_contig00005 160552 161901 - tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100293.1 tetracycline efflux MFS transporter Tet(38) SRR13968041_contigs SRR13968041_contigs.fa nucleotide SRR13968041_contig00017 6445 7287 - blaZ penicillin-hydrolyzing class A beta-lactamase BlaZ core AMR AMR BETA-LACTAM BETA-LACTAM EXACTX 281 281 100.0 100.0 281 WP_000733289.1 penicillin-hydrolyzing class A beta-lactamase BlaZ SRR13968041_contigs SRR13968041_contigs.fa nucleotide SRR13968041_contig00017 7394 9148 + blaR1 beta-lactam sensor/signal transducer BlaR1 core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 585 585 100.0 95.56 585 WP_001096386.1 beta-lactam sensor/signal transducer BlaR1 SRR13968041_contigs SRR13968041_contigs.fa nucleotide SRR13968041_contig00017 9141 9518 + blaI penicillinase repressor BlaI core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 126 126 100.0 99.21 126 WP_001284656.1 penicillinase repressor BlaI SRR13967526_contigs SRR13967526_contigs.fa nucleotide SRR13967526_contig00001 138413 138889 - dfrB_A135T Staphylococcus aureus trimethoprim resistant DfrB core AMR POINT TRIMETHOPRIM TRIMETHOPRIM POINTX 159 159 100.0 98.11 159 WP_000175752.1 dihydrofolate reductase DfrB SRR13967526_contigs SRR13967526_contigs.fa nucleotide SRR13967526_contig00017 44082 45431 + tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100293.1 tetracycline efflux MFS transporter Tet(38) SRR13967526_contigs SRR13967526_contigs.fa nucleotide SRR13967526_contig00023 13953 14330 - blaI penicillinase repressor BlaI core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 126 126 100.0 96.03 126 WP_001284656.1 penicillinase repressor BlaI SRR13967526_contigs SRR13967526_contigs.fa nucleotide SRR13967526_contig00023 16184 17026 + blaZ penicillin-hydrolyzing class A beta-lactamase BlaZ core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 281 281 100.0 94.66 281 WP_000733281.1 penicillin-hydrolyzing class A beta-lactamase BlaZ SRR13967657_contigs SRR13967657_contigs.fa nucleotide SRR13967657_contig00001 372642 373991 - tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100294.1 tetracycline efflux MFS transporter Tet(38) SRR13967657_contigs SRR13967657_contigs.fa nucleotide SRR13967657_contig00006 107740 108582 - blaZ penicillin-hydrolyzing class A beta-lactamase BlaZ core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 281 281 100.0 94.66 281 WP_000733281.1 penicillin-hydrolyzing class A beta-lactamase BlaZ SRR13967657_contigs SRR13967657_contigs.fa nucleotide SRR13967657_contig00006 110436 110813 + blaI penicillinase repressor BlaI core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 126 126 100.0 96.03 126 WP_001284656.1 penicillinase repressor BlaI SRR13967657_contigs SRR13967657_contigs.fa nucleotide SRR13967657_contig00017 329 745 + fosB FosB/FosD family fosfomycin resistance bacillithiol transferase core AMR AMR FOSFOMYCIN FOSFOMYCIN BLASTX 139 139 100.0 99.28 139 WP_000920239.1 FosB/FosD family fosfomycin resistance bacillithiol transferase SRR13968404_contigs SRR13968404_contigs.fa nucleotide SRR13968404_contig00003 69118 69495 - blaI penicillinase repressor BlaI core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 126 126 100.0 96.03 126 WP_001284656.1 penicillinase repressor BlaI SRR13968404_contigs SRR13968404_contigs.fa nucleotide SRR13968404_contig00003 71349 72191 + blaZ penicillin-hydrolyzing class A beta-lactamase BlaZ core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 281 281 100.0 94.66 281 WP_000733281.1 penicillin-hydrolyzing class A beta-lactamase BlaZ SRR13968404_contigs SRR13968404_contigs.fa nucleotide SRR13968404_contig00008 48894 51293 + parC_S80F Staphylococcus aureus quinolone resistant ParC core AMR POINT QUINOLONE QUINOLONE POINTX 800 800 100.0 99.12 800 WP_001289586.1 DNA topoisomerase IV subunit A ParC SRR13968404_contigs SRR13968404_contigs.fa nucleotide SRR13968404_contig00008 138469 138945 - dfrB_A135T Staphylococcus aureus trimethoprim resistant DfrB core AMR POINT TRIMETHOPRIM TRIMETHOPRIM POINTX 159 159 100.0 98.11 159 WP_000175752.1 dihydrofolate reductase DfrB SRR13968404_contigs SRR13968404_contigs.fa nucleotide SRR13968404_contig00014 13084 15744 + gyrA_S84L Staphylococcus aureus quinolone resistant GyrA core AMR POINT QUINOLONE QUINOLONE POINTX 887 887 100.0 99.77 887 WP_000819084.1 DNA gyrase subunit A GyrA SRR13968404_contigs SRR13968404_contigs.fa nucleotide SRR13968404_contig00014 45776 47779 - mecA PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA core AMR AMR BETA-LACTAM METHICILLIN BLASTX 668 668 100.0 99.85 668 WP_000721309.1 PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA SRR13968404_contigs SRR13968404_contigs.fa nucleotide SRR13968404_contig00014 47879 48853 + mecR1 beta-lactam sensor/signal transducer MecR1 core AMR AMR BETA-LACTAM METHICILLIN PARTIALX 325 585 55.56 100.0 325 WP_000952923.1 beta-lactam sensor/signal transducer MecR1 SRR13968404_contigs SRR13968404_contigs.fa nucleotide SRR13968404_contig00015 44198 45547 + tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100293.1 tetracycline efflux MFS transporter Tet(38) SRR13968404_contigs SRR13968404_contigs.fa nucleotide SRR13968404_contig00025 711 1442 + erm(C) 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C) core AMR AMR LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN EXACTX 244 244 100.0 100.0 244 WP_001003263.1 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C) SRR13968607_contigs SRR13968607_contigs.fa nucleotide SRR13968607_contig00002 54579 55928 + tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100293.1 tetracycline efflux MFS transporter Tet(38) SRR13968607_contigs SRR13968607_contigs.fa nucleotide SRR13968607_contig00002 280676 282031 - glpT_A100V Staphylococcus aureus fosfomycin resistant GlpT core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 452 452 100.0 99.78 452 WP_001010111.1 glycerol-3-phosphate transporter GlpT SRR13968607_contigs SRR13968607_contigs.fa nucleotide SRR13968607_contig00006 68125 69387 + murA_E291D Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13968607_contigs SRR13968607_contigs.fa nucleotide SRR13968607_contig00006 68125 69387 + murA_T396N Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13968607_contigs SRR13968607_contigs.fa nucleotide SRR13968607_contig00011 11375 11752 - blaI penicillinase repressor BlaI core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 126 126 100.0 99.21 126 WP_001284656.1 penicillinase repressor BlaI SRR13968607_contigs SRR13968607_contigs.fa nucleotide SRR13968607_contig00011 11745 13499 - blaR1 beta-lactam sensor/signal transducer BlaR1 core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 585 585 100.0 95.56 585 WP_001096386.1 beta-lactam sensor/signal transducer BlaR1 SRR13968607_contigs SRR13968607_contigs.fa nucleotide SRR13968607_contig00011 13606 14448 + blaZ penicillin-hydrolyzing class A beta-lactamase BlaZ core AMR AMR BETA-LACTAM BETA-LACTAM EXACTX 281 281 100.0 100.0 281 WP_000733289.1 penicillin-hydrolyzing class A beta-lactamase BlaZ SRR13968716_contigs SRR13968716_contigs.fa nucleotide SRR13968716_contig00001 349470 350819 - tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100299.1 tetracycline efflux MFS transporter Tet(38) SRR13968716_contigs SRR13968716_contigs.fa nucleotide SRR13968716_contig00011 31390 31806 + fosB FosB/FosD family fosfomycin resistance bacillithiol transferase core AMR AMR FOSFOMYCIN FOSFOMYCIN EXACTX 139 139 100.0 100.0 139 WP_000920239.1 FosB/FosD family fosfomycin resistance bacillithiol transferase SRR13968716_contigs SRR13968716_contigs.fa nucleotide SRR13968716_contig00015 8477 8854 - blaI penicillinase repressor BlaI core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 126 126 100.0 99.21 126 WP_001284656.1 penicillinase repressor BlaI SRR13968716_contigs SRR13968716_contigs.fa nucleotide SRR13968716_contig00015 8847 10601 - blaR1 beta-lactam sensor/signal transducer BlaR1 core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 585 585 100.0 95.04 585 WP_001096376.1 beta-lactam sensor/signal transducer BlaR1 SRR13968716_contigs SRR13968716_contigs.fa nucleotide SRR13968716_contig00015 10708 11550 + blaZ penicillin-hydrolyzing class A beta-lactamase BlaZ core AMR AMR BETA-LACTAM BETA-LACTAM EXACTX 281 281 100.0 100.0 281 WP_000733281.1 penicillin-hydrolyzing class A beta-lactamase BlaZ SRR13967478_contigs SRR13967478_contigs.fa nucleotide SRR13967478_contig00002 344198 345547 + tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100299.1 tetracycline efflux MFS transporter Tet(38) SRR13967478_contigs SRR13967478_contigs.fa nucleotide SRR13967478_contig00004 153462 153878 + fosB FosB/FosD family fosfomycin resistance bacillithiol transferase core AMR AMR FOSFOMYCIN FOSFOMYCIN EXACTX 139 139 100.0 100.0 139 WP_000920239.1 FosB/FosD family fosfomycin resistance bacillithiol transferase SRR13968206_contigs SRR13968206_contigs.fa nucleotide SRR13968206_contig00001 81740 83089 + tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100293.1 tetracycline efflux MFS transporter Tet(38) SRR13968206_contigs SRR13968206_contigs.fa nucleotide SRR13968206_contig00003 171457 171873 - fosB FosB/FosD family fosfomycin resistance bacillithiol transferase core AMR AMR FOSFOMYCIN FOSFOMYCIN BLASTX 139 139 100.0 98.56 139 WP_000920239.1 FosB/FosD family fosfomycin resistance bacillithiol transferase SRR13968206_contigs SRR13968206_contigs.fa nucleotide SRR13968206_contig00017 6445 7287 - blaZ penicillin-hydrolyzing class A beta-lactamase BlaZ core AMR AMR BETA-LACTAM BETA-LACTAM EXACTX 281 281 100.0 100.0 281 WP_000733289.1 penicillin-hydrolyzing class A beta-lactamase BlaZ SRR13968206_contigs SRR13968206_contigs.fa nucleotide SRR13968206_contig00017 7394 9148 + blaR1 beta-lactam sensor/signal transducer BlaR1 core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 585 585 100.0 95.56 585 WP_001096386.1 beta-lactam sensor/signal transducer BlaR1 SRR13968206_contigs SRR13968206_contigs.fa nucleotide SRR13968206_contig00017 9141 9518 + blaI penicillinase repressor BlaI core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 126 126 100.0 99.21 126 WP_001284656.1 penicillinase repressor BlaI SRR13967160_contigs SRR13967160_contigs.fa nucleotide SRR13967160_contig00003 60515 61864 + tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100293.1 tetracycline efflux MFS transporter Tet(38) SRR13967160_contigs SRR13967160_contigs.fa nucleotide SRR13967160_contig00007 16833 18188 - glpT_A100V Staphylococcus aureus fosfomycin resistant GlpT core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 452 452 100.0 99.56 452 WP_001010111.1 glycerol-3-phosphate transporter GlpT SRR13967160_contigs SRR13967160_contigs.fa nucleotide SRR13967160_contig00007 16833 18188 - glpT_V213I Staphylococcus aureus fosfomycin resistant GlpT core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 452 452 100.0 99.56 452 WP_001010111.1 glycerol-3-phosphate transporter GlpT SRR13967160_contigs SRR13967160_contigs.fa nucleotide SRR13967160_contig00009 24374 24751 - blaI penicillinase repressor BlaI core AMR AMR BETA-LACTAM BETA-LACTAM EXACTX 126 126 100.0 100.0 126 WP_001284656.1 penicillinase repressor BlaI SRR13967160_contigs SRR13967160_contigs.fa nucleotide SRR13967160_contig00009 24744 26498 - blaR1 beta-lactam sensor/signal transducer BlaR1 core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 585 585 100.0 99.83 585 WP_001096376.1 beta-lactam sensor/signal transducer BlaR1 SRR13967160_contigs SRR13967160_contigs.fa nucleotide SRR13967160_contig00009 26605 27447 + blaPC1 BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1 core AMR AMR BETA-LACTAM BETA-LACTAM ALLELEX 281 281 100.0 100.0 281 WP_000733283.1 BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1 SRR13967160_contigs SRR13967160_contigs.fa nucleotide SRR13967160_contig00010 20718 21134 - fosB FosB/FosD family fosfomycin resistance bacillithiol transferase core AMR AMR FOSFOMYCIN FOSFOMYCIN BLASTX 139 139 100.0 99.28 139 WP_000920239.1 FosB/FosD family fosfomycin resistance bacillithiol transferase SRR13967160_contigs SRR13967160_contigs.fa nucleotide SRR13967160_contig00012 38309 39571 - murA_D278E Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13967160_contigs SRR13967160_contigs.fa nucleotide SRR13967160_contig00012 38309 39571 - murA_E291D Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13968541_contigs SRR13968541_contigs.fa nucleotide SRR13968541_contig00002 203179 203595 - fosB FosB/FosD family fosfomycin resistance bacillithiol transferase core AMR AMR FOSFOMYCIN FOSFOMYCIN BLASTX 139 139 100.0 98.56 139 WP_000920239.1 FosB/FosD family fosfomycin resistance bacillithiol transferase SRR13968541_contigs SRR13968541_contigs.fa nucleotide SRR13968541_contig00007 109344 110693 - tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100293.1 tetracycline efflux MFS transporter Tet(38) SRR13968541_contigs SRR13968541_contigs.fa nucleotide SRR13968541_contig00017 11378 11755 - blaI penicillinase repressor BlaI core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 126 126 100.0 99.21 126 WP_001284656.1 penicillinase repressor BlaI SRR13968541_contigs SRR13968541_contigs.fa nucleotide SRR13968541_contig00017 11748 13502 - blaR1 beta-lactam sensor/signal transducer BlaR1 core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 585 585 100.0 95.56 585 WP_001096386.1 beta-lactam sensor/signal transducer BlaR1 SRR13968541_contigs SRR13968541_contigs.fa nucleotide SRR13968541_contig00017 13609 14451 + blaZ penicillin-hydrolyzing class A beta-lactamase BlaZ core AMR AMR BETA-LACTAM BETA-LACTAM EXACTX 281 281 100.0 100.0 281 WP_000733289.1 penicillin-hydrolyzing class A beta-lactamase BlaZ SRR13968176_contigs SRR13968176_contigs.fa nucleotide SRR13968176_contig00004 125144 126493 + tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE BLASTX 450 450 100.0 99.78 450 WP_001100300.1 tetracycline efflux MFS transporter Tet(38) SRR13968176_contigs SRR13968176_contigs.fa nucleotide SRR13968176_contig00020 11304 11681 - blaI penicillinase repressor BlaI core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 126 126 100.0 99.21 126 WP_001284656.1 penicillinase repressor BlaI SRR13968176_contigs SRR13968176_contigs.fa nucleotide SRR13968176_contig00020 11674 13428 - blaR1 beta-lactam sensor/signal transducer BlaR1 core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 585 585 100.0 95.56 585 WP_001096386.1 beta-lactam sensor/signal transducer BlaR1 SRR13968176_contigs SRR13968176_contigs.fa nucleotide SRR13968176_contig00020 13535 14377 + blaZ penicillin-hydrolyzing class A beta-lactamase BlaZ core AMR AMR BETA-LACTAM BETA-LACTAM EXACTX 281 281 100.0 100.0 281 WP_000733289.1 penicillin-hydrolyzing class A beta-lactamase BlaZ SRR13968526_contigs SRR13968526_contigs.fa nucleotide SRR13968526_contig00003 170622 171038 - fosB FosB/FosD family fosfomycin resistance bacillithiol transferase core AMR AMR FOSFOMYCIN FOSFOMYCIN BLASTX 139 139 100.0 98.56 139 WP_000920239.1 FosB/FosD family fosfomycin resistance bacillithiol transferase SRR13968526_contigs SRR13968526_contigs.fa nucleotide SRR13968526_contig00008 108498 109847 - tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100293.1 tetracycline efflux MFS transporter Tet(38) SRR13967514_contigs SRR13967514_contigs.fa nucleotide SRR13967514_contig00001 109917 110294 - blaI penicillinase repressor BlaI core AMR AMR BETA-LACTAM BETA-LACTAM EXACTX 126 126 100.0 100.0 126 WP_001284656.1 penicillinase repressor BlaI SRR13967514_contigs SRR13967514_contigs.fa nucleotide SRR13967514_contig00001 110287 112041 - blaR1 beta-lactam sensor/signal transducer BlaR1 core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 585 585 100.0 99.49 585 WP_001096376.1 beta-lactam sensor/signal transducer BlaR1 SRR13967514_contigs SRR13967514_contigs.fa nucleotide SRR13967514_contig00001 112148 112990 + blaZ penicillin-hydrolyzing class A beta-lactamase BlaZ core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 281 281 100.0 99.64 281 WP_000733283.1 BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1 SRR13967514_contigs SRR13967514_contigs.fa nucleotide SRR13967514_contig00004 60497 61846 + tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100293.1 tetracycline efflux MFS transporter Tet(38) SRR13967514_contigs SRR13967514_contigs.fa nucleotide SRR13967514_contig00005 110863 113514 + gyrA_S84L Staphylococcus aureus quinolone resistant GyrA core AMR POINT QUINOLONE QUINOLONE POINTX 884 887 100.0 98.87 887 WP_000819084.1 DNA gyrase subunit A GyrA SRR13967514_contigs SRR13967514_contigs.fa nucleotide SRR13967514_contig00005 144021 144422 - bleO bleomycin binding protein core AMR AMR BLEOMYCIN BLEOMYCIN EXACTX 134 134 100.0 100.0 134 WP_001242578.1 bleomycin binding protein SRR13967514_contigs SRR13967514_contigs.fa nucleotide SRR13967514_contig00005 144642 145400 - aadD1 aminoglycoside O-nucleotidyltransferase ANT(4')-Ia core AMR AMR AMINOGLYCOSIDE KANAMYCIN/TOBRAMYCIN BLASTX 253 253 100.0 99.6 253 WP_001014230.1 aminoglycoside O-nucleotidyltransferase ANT(4')-Ia SRR13967514_contigs SRR13967514_contigs.fa nucleotide SRR13967514_contig00005 148815 150818 - mecA PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA core AMR AMR BETA-LACTAM METHICILLIN EXACTX 668 668 100.0 100.0 668 WP_000721310.1 PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA SRR13967514_contigs SRR13967514_contigs.fa nucleotide SRR13967514_contig00005 150918 152672 + mecR1 beta-lactam sensor/signal transducer MecR1 core AMR AMR BETA-LACTAM METHICILLIN EXACTX 585 585 100.0 100.0 585 WP_000952923.1 beta-lactam sensor/signal transducer MecR1 SRR13967514_contigs SRR13967514_contigs.fa nucleotide SRR13967514_contig00005 152675 153043 + mecI mecA-type methicillin resistance repressor MecI core AMR AMR BETA-LACTAM METHICILLIN INTERNAL_STOP 123 123 100.0 99.19 123 WP_000369214.1 mecA-type methicillin resistance repressor MecI SRR13967514_contigs SRR13967514_contigs.fa nucleotide SRR13967514_contig00007 54903 55319 - fosB FosB/FosD family fosfomycin resistance bacillithiol transferase core AMR AMR FOSFOMYCIN FOSFOMYCIN BLASTX 139 139 100.0 99.28 139 WP_000920239.1 FosB/FosD family fosfomycin resistance bacillithiol transferase SRR13967514_contigs SRR13967514_contigs.fa nucleotide SRR13967514_contig00020 15225 16580 - glpT_A100V Staphylococcus aureus fosfomycin resistant GlpT core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 452 452 100.0 99.56 452 WP_001010111.1 glycerol-3-phosphate transporter GlpT SRR13967514_contigs SRR13967514_contigs.fa nucleotide SRR13967514_contig00020 15225 16580 - glpT_V213I Staphylococcus aureus fosfomycin resistant GlpT core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 452 452 100.0 99.56 452 WP_001010111.1 glycerol-3-phosphate transporter GlpT SRR13967514_contigs SRR13967514_contigs.fa nucleotide SRR13967514_contig00023 2826 4088 - murA_D278E Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13967514_contigs SRR13967514_contigs.fa nucleotide SRR13967514_contig00023 2826 4088 - murA_E291D Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13967514_contigs SRR13967514_contigs.fa nucleotide SRR13967514_contig00034 9923 12322 + parC_S80F Staphylococcus aureus quinolone resistant ParC core AMR POINT QUINOLONE QUINOLONE POINTX 800 800 100.0 99.88 800 WP_001289586.1 DNA topoisomerase IV subunit A ParC SRR13967514_contigs SRR13967514_contigs.fa nucleotide SRR13967514_contig00041 1427 2155 + erm(A) 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A) core AMR AMR LINCOSAMIDE/MACROLIDE AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN EXACTX 243 243 100.0 100.0 243 WP_001072201.1 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A) SRR13967514_contigs SRR13967514_contigs.fa nucleotide SRR13967514_contig00041 2287 3066 - ant(9)-Ia aminoglycoside nucleotidyltransferase ANT(9)-Ia core AMR AMR AMINOGLYCOSIDE SPECTINOMYCIN EXACTX 260 260 100.0 100.0 260 WP_000067268.1 aminoglycoside nucleotidyltransferase ANT(9)-Ia SRR13968677_contigs SRR13968677_contigs.fa nucleotide SRR13968677_contig00001 134408 135763 + glpT_A100V Staphylococcus aureus fosfomycin resistant GlpT core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 452 452 100.0 99.56 452 WP_001010111.1 glycerol-3-phosphate transporter GlpT SRR13968677_contigs SRR13968677_contigs.fa nucleotide SRR13968677_contig00001 134408 135763 + glpT_V213I Staphylococcus aureus fosfomycin resistant GlpT core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 452 452 100.0 99.56 452 WP_001010111.1 glycerol-3-phosphate transporter GlpT SRR13968677_contigs SRR13968677_contigs.fa nucleotide SRR13968677_contig00001 360108 361457 - tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100293.1 tetracycline efflux MFS transporter Tet(38) SRR13968677_contigs SRR13968677_contigs.fa nucleotide SRR13968677_contig00003 121850 122692 - blaPC1 BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1 core AMR AMR BETA-LACTAM BETA-LACTAM ALLELEX 281 281 100.0 100.0 281 WP_000733283.1 BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1 SRR13968677_contigs SRR13968677_contigs.fa nucleotide SRR13968677_contig00003 122799 124553 + blaR1 beta-lactam sensor/signal transducer BlaR1 core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 585 585 100.0 99.49 585 WP_001096376.1 beta-lactam sensor/signal transducer BlaR1 SRR13968677_contigs SRR13968677_contigs.fa nucleotide SRR13968677_contig00003 124546 124923 + blaI penicillinase repressor BlaI core AMR AMR BETA-LACTAM BETA-LACTAM EXACTX 126 126 100.0 100.0 126 WP_001284656.1 penicillinase repressor BlaI SRR13968677_contigs SRR13968677_contigs.fa nucleotide SRR13968677_contig00007 95091 95507 + fosB FosB/FosD family fosfomycin resistance bacillithiol transferase core AMR AMR FOSFOMYCIN FOSFOMYCIN BLASTX 139 139 100.0 99.28 139 WP_000920239.1 FosB/FosD family fosfomycin resistance bacillithiol transferase SRR13968677_contigs SRR13968677_contigs.fa nucleotide SRR13968677_contig00010 26797 29448 - gyrA_S84L Staphylococcus aureus quinolone resistant GyrA core AMR POINT QUINOLONE QUINOLONE POINTX 884 887 100.0 98.87 887 WP_000819084.1 DNA gyrase subunit A GyrA SRR13968677_contigs SRR13968677_contigs.fa nucleotide SRR13968677_contig00011 38315 39577 - murA_D278E Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13968677_contigs SRR13968677_contigs.fa nucleotide SRR13968677_contig00011 38315 39577 - murA_E291D Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13968677_contigs SRR13968677_contigs.fa nucleotide SRR13968677_contig00025 9362 11761 - parC_S80F Staphylococcus aureus quinolone resistant ParC core AMR POINT QUINOLONE QUINOLONE POINTX 800 800 100.0 99.88 800 WP_001289586.1 DNA topoisomerase IV subunit A ParC SRR13968677_contigs SRR13968677_contigs.fa nucleotide SRR13968677_contig00028 5425 5793 - mecI mecA-type methicillin resistance repressor MecI core AMR AMR BETA-LACTAM METHICILLIN INTERNAL_STOP 123 123 100.0 99.19 123 WP_000369214.1 mecA-type methicillin resistance repressor MecI SRR13968677_contigs SRR13968677_contigs.fa nucleotide SRR13968677_contig00028 5796 7550 - mecR1 beta-lactam sensor/signal transducer MecR1 core AMR AMR BETA-LACTAM METHICILLIN EXACTX 585 585 100.0 100.0 585 WP_000952923.1 beta-lactam sensor/signal transducer MecR1 SRR13968677_contigs SRR13968677_contigs.fa nucleotide SRR13968677_contig00028 7650 9653 + mecA PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA core AMR AMR BETA-LACTAM METHICILLIN BLASTX 668 668 100.0 99.85 668 WP_000721310.1 PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA SRR13968677_contigs SRR13968677_contigs.fa nucleotide SRR13968677_contig00029 2805 3281 - dfrB_F99Y Staphylococcus aureus trimethoprim resistant DfrB core AMR POINT TRIMETHOPRIM TRIMETHOPRIM POINTX 159 159 100.0 98.11 159 WP_000175752.1 dihydrofolate reductase DfrB SRR13968677_contigs SRR13968677_contigs.fa nucleotide SRR13968677_contig00032 1427 2155 + erm(A) 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A) core AMR AMR LINCOSAMIDE/MACROLIDE AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN EXACTX 243 243 100.0 100.0 243 WP_001072201.1 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A) SRR13968677_contigs SRR13968677_contigs.fa nucleotide SRR13968677_contig00032 2287 3066 - ant(9)-Ia aminoglycoside nucleotidyltransferase ANT(9)-Ia core AMR AMR AMINOGLYCOSIDE SPECTINOMYCIN EXACTX 260 260 100.0 100.0 260 WP_000067268.1 aminoglycoside nucleotidyltransferase ANT(9)-Ia SRR13968677_contigs SRR13968677_contigs.fa nucleotide SRR13968677_contig00035 3146 3547 - bleO bleomycin binding protein core AMR AMR BLEOMYCIN BLEOMYCIN EXACTX 134 134 100.0 100.0 134 WP_001242578.1 bleomycin binding protein SRR13968677_contigs SRR13968677_contigs.fa nucleotide SRR13968677_contig00035 3767 4525 - aadD1 aminoglycoside O-nucleotidyltransferase ANT(4')-Ia core AMR AMR AMINOGLYCOSIDE KANAMYCIN/TOBRAMYCIN EXACTX 253 253 100.0 100.0 253 WP_001014230.1 aminoglycoside O-nucleotidyltransferase ANT(4')-Ia SRR13968677_contigs SRR13968677_contigs.fa nucleotide SRR13968677_contig00036 848 3919 + mupA mupirocin-resistant isoleucine--tRNA ligase MupA core AMR AMR MUPIROCIN MUPIROCIN BLASTX 1024 1024 100.0 99.9 1024 WP_000163435.1 mupirocin-resistant isoleucine--tRNA ligase MupA SRR13967452_contigs SRR13967452_contigs.fa nucleotide SRR13967452_contig00002 116264 116680 - fosB FosB/FosD family fosfomycin resistance bacillithiol transferase core AMR AMR FOSFOMYCIN FOSFOMYCIN BLASTX 139 139 100.0 99.28 139 WP_000920239.1 FosB/FosD family fosfomycin resistance bacillithiol transferase SRR13967452_contigs SRR13967452_contigs.fa nucleotide SRR13967452_contig00003 140684 142039 - glpT_A100V Staphylococcus aureus fosfomycin resistant GlpT core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 452 452 100.0 99.56 452 WP_001010111.1 glycerol-3-phosphate transporter GlpT SRR13967452_contigs SRR13967452_contigs.fa nucleotide SRR13967452_contig00003 140684 142039 - glpT_V213I Staphylococcus aureus fosfomycin resistant GlpT core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 452 452 100.0 99.56 452 WP_001010111.1 glycerol-3-phosphate transporter GlpT SRR13967452_contigs SRR13967452_contigs.fa nucleotide SRR13967452_contig00005 67974 68351 - blaI penicillinase repressor BlaI core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 126 126 100.0 96.03 126 WP_001284656.1 penicillinase repressor BlaI SRR13967452_contigs SRR13967452_contigs.fa nucleotide SRR13967452_contig00005 70205 71047 + blaZ penicillin-hydrolyzing class A beta-lactamase BlaZ core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 281 281 100.0 94.66 281 WP_000733281.1 penicillin-hydrolyzing class A beta-lactamase BlaZ SRR13967452_contigs SRR13967452_contigs.fa nucleotide SRR13967452_contig00007 113914 115263 - tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100293.1 tetracycline efflux MFS transporter Tet(38) SRR13967452_contigs SRR13967452_contigs.fa nucleotide SRR13967452_contig00015 45629 46891 + murA_D278E Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13967452_contigs SRR13967452_contigs.fa nucleotide SRR13967452_contig00015 45629 46891 + murA_E291D Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13967279_contigs SRR13967279_contigs.fa nucleotide SRR13967279_contig00001 398462 398839 - blaI penicillinase repressor BlaI core AMR AMR BETA-LACTAM BETA-LACTAM EXACTX 126 126 100.0 100.0 126 WP_001284656.1 penicillinase repressor BlaI SRR13967279_contigs SRR13967279_contigs.fa nucleotide SRR13967279_contig00001 398832 400151 - blaR1 beta-lactam sensor/signal transducer BlaR1 core AMR AMR BETA-LACTAM BETA-LACTAM INTERNAL_STOP 440 585 75.56 97.96 442 WP_001096376.1 beta-lactam sensor/signal transducer BlaR1 SRR13967279_contigs SRR13967279_contigs.fa nucleotide SRR13967279_contig00001 400692 401534 + blaPC1 BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1 core AMR AMR BETA-LACTAM BETA-LACTAM ALLELEX 281 281 100.0 100.0 281 WP_000733283.1 BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1 SRR13967279_contigs SRR13967279_contigs.fa nucleotide SRR13967279_contig00002 30753 32108 + glpT_A100V Staphylococcus aureus fosfomycin resistant GlpT core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 452 452 100.0 99.56 452 WP_001010111.1 glycerol-3-phosphate transporter GlpT SRR13967279_contigs SRR13967279_contigs.fa nucleotide SRR13967279_contig00002 30753 32108 + glpT_V213I Staphylococcus aureus fosfomycin resistant GlpT core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 452 452 100.0 99.56 452 WP_001010111.1 glycerol-3-phosphate transporter GlpT SRR13967279_contigs SRR13967279_contigs.fa nucleotide SRR13967279_contig00002 256465 257814 - tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100293.1 tetracycline efflux MFS transporter Tet(38) SRR13967279_contigs SRR13967279_contigs.fa nucleotide SRR13967279_contig00008 95034 95450 + fosB FosB/FosD family fosfomycin resistance bacillithiol transferase core AMR AMR FOSFOMYCIN FOSFOMYCIN BLASTX 139 139 100.0 99.28 139 WP_000920239.1 FosB/FosD family fosfomycin resistance bacillithiol transferase SRR13967279_contigs SRR13967279_contigs.fa nucleotide SRR13967279_contig00011 38315 39577 - murA_D278E Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13967279_contigs SRR13967279_contigs.fa nucleotide SRR13967279_contig00011 38315 39577 - murA_E291D Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13967960_contigs SRR13967960_contigs.fa nucleotide SRR13967960_contig00001 134503 135858 + glpT_A100V Staphylococcus aureus fosfomycin resistant GlpT core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 452 452 100.0 99.56 452 WP_001010111.1 glycerol-3-phosphate transporter GlpT SRR13967960_contigs SRR13967960_contigs.fa nucleotide SRR13967960_contig00001 134503 135858 + glpT_V213I Staphylococcus aureus fosfomycin resistant GlpT core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 452 452 100.0 99.56 452 WP_001010111.1 glycerol-3-phosphate transporter GlpT SRR13967960_contigs SRR13967960_contigs.fa nucleotide SRR13967960_contig00001 360215 361564 - tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE BLASTX 450 450 100.0 99.78 450 WP_001100293.1 tetracycline efflux MFS transporter Tet(38) SRR13967960_contigs SRR13967960_contigs.fa nucleotide SRR13967960_contig00007 54945 55361 - fosB FosB/FosD family fosfomycin resistance bacillithiol transferase core AMR AMR FOSFOMYCIN FOSFOMYCIN BLASTX 139 139 100.0 99.28 139 WP_000920239.1 FosB/FosD family fosfomycin resistance bacillithiol transferase SRR13967960_contigs SRR13967960_contigs.fa nucleotide SRR13967960_contig00013 38315 39577 - murA_D278E Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13967960_contigs SRR13967960_contigs.fa nucleotide SRR13967960_contig00013 38315 39577 - murA_E291D Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13967960_contigs SRR13967960_contigs.fa nucleotide SRR13967960_contig00022 16140 16982 - blaZ penicillin-hydrolyzing class A beta-lactamase BlaZ core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 281 281 100.0 99.64 281 WP_000733283.1 BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1 SRR13967960_contigs SRR13967960_contigs.fa nucleotide SRR13967960_contig00022 17089 18843 + blaR1 beta-lactam sensor/signal transducer BlaR1 core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 585 585 100.0 99.83 585 WP_001096376.1 beta-lactam sensor/signal transducer BlaR1 SRR13967960_contigs SRR13967960_contigs.fa nucleotide SRR13967960_contig00022 18836 19213 + blaI penicillinase repressor BlaI core AMR AMR BETA-LACTAM BETA-LACTAM EXACTX 126 126 100.0 100.0 126 WP_001284656.1 penicillinase repressor BlaI SRR13966803_contigs SRR13966803_contigs.fa nucleotide SRR13966803_contig00003 81721 83070 + tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100293.1 tetracycline efflux MFS transporter Tet(38) SRR13966803_contigs SRR13966803_contigs.fa nucleotide SRR13966803_contig00019 38686 39102 - fosB FosB/FosD family fosfomycin resistance bacillithiol transferase core AMR AMR FOSFOMYCIN FOSFOMYCIN BLASTX 139 139 100.0 98.56 139 WP_000920239.1 FosB/FosD family fosfomycin resistance bacillithiol transferase SRR13966803_contigs SRR13966803_contigs.fa nucleotide SRR13966803_contig00023 11312 11689 - blaI penicillinase repressor BlaI core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 126 126 100.0 99.21 126 WP_001284656.1 penicillinase repressor BlaI SRR13966803_contigs SRR13966803_contigs.fa nucleotide SRR13966803_contig00023 11682 13436 - blaR1 beta-lactam sensor/signal transducer BlaR1 core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 585 585 100.0 95.56 585 WP_001096386.1 beta-lactam sensor/signal transducer BlaR1 SRR13966803_contigs SRR13966803_contigs.fa nucleotide SRR13966803_contig00023 13543 14385 + blaZ penicillin-hydrolyzing class A beta-lactamase BlaZ core AMR AMR BETA-LACTAM BETA-LACTAM EXACTX 281 281 100.0 100.0 281 WP_000733289.1 penicillin-hydrolyzing class A beta-lactamase BlaZ SRR13966935_contigs SRR13966935_contigs.fa nucleotide SRR13966935_contig00001 137149 138504 + glpT_A100V Staphylococcus aureus fosfomycin resistant GlpT core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 452 452 100.0 99.56 452 WP_001010111.1 glycerol-3-phosphate transporter GlpT SRR13966935_contigs SRR13966935_contigs.fa nucleotide SRR13966935_contig00001 137149 138504 + glpT_L27F Staphylococcus aureus fosfomycin resistant GlpT core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 452 452 100.0 99.56 452 WP_001010111.1 glycerol-3-phosphate transporter GlpT SRR13966935_contigs SRR13966935_contigs.fa nucleotide SRR13966935_contig00001 364054 365403 - tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100293.1 tetracycline efflux MFS transporter Tet(38) SRR13966935_contigs SRR13966935_contigs.fa nucleotide SRR13966935_contig00003 94739 95155 + fosB FosB/FosD family fosfomycin resistance bacillithiol transferase core AMR AMR FOSFOMYCIN FOSFOMYCIN BLASTX 139 139 100.0 98.56 139 WP_000920239.1 FosB/FosD family fosfomycin resistance bacillithiol transferase SRR13966935_contigs SRR13966935_contigs.fa nucleotide SRR13966935_contig00005 117186 117680 + dfrG trimethoprim-resistant dihydrofolate reductase DfrG core AMR AMR TRIMETHOPRIM TRIMETHOPRIM EXACTX 165 165 100.0 100.0 165 WP_000868795.1 trimethoprim-resistant dihydrofolate reductase DfrG SRR13966935_contigs SRR13966935_contigs.fa nucleotide SRR13966935_contig00007 53673 54050 - blaI penicillinase repressor BlaI core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 126 126 100.0 96.83 126 WP_001284656.1 penicillinase repressor BlaI SRR13966935_contigs SRR13966935_contigs.fa nucleotide SRR13966935_contig00007 55904 56746 + blaZ penicillin-hydrolyzing class A beta-lactamase BlaZ core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 281 281 100.0 94.66 281 WP_000733281.1 penicillin-hydrolyzing class A beta-lactamase BlaZ SRR13966935_contigs SRR13966935_contigs.fa nucleotide SRR13966935_contig00012 17091 18353 - murA_E291D Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13966935_contigs SRR13966935_contigs.fa nucleotide SRR13966935_contig00012 17091 18353 - murA_T396N Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13966935_contigs SRR13966935_contigs.fa nucleotide SRR13966935_contig00027 2621 3997 - tet(K) tetracycline efflux MFS transporter Tet(K) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 459 459 100.0 100.0 459 WP_000492283.1 tetracycline efflux MFS transporter Tet(K) SRR13967779_contigs SRR13967779_contigs.fa nucleotide SRR13967779_contig00001 352896 354245 - tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100294.1 tetracycline efflux MFS transporter Tet(38) SRR13967779_contigs SRR13967779_contigs.fa nucleotide SRR13967779_contig00002 537776 538618 - blaZ penicillin-hydrolyzing class A beta-lactamase BlaZ core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 281 281 100.0 98.58 281 WP_000733274.1 penicillin-hydrolyzing class A beta-lactamase BlaZ SRR13967779_contigs SRR13967779_contigs.fa nucleotide SRR13967779_contig00002 538725 540479 + blaR1 beta-lactam sensor/signal transducer BlaR1 core AMR AMR BETA-LACTAM BETA-LACTAM INTERNAL_STOP 585 585 100.0 98.97 585 WP_001096392.1 beta-lactam sensor/signal transducer BlaR1 SRR13967779_contigs SRR13967779_contigs.fa nucleotide SRR13967779_contig00002 540472 540849 + blaI penicillinase repressor BlaI core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 126 126 100.0 98.41 126 WP_001284656.1 penicillinase repressor BlaI SRR13967779_contigs SRR13967779_contigs.fa nucleotide SRR13967779_contig00016 407 823 + fosB FosB/FosD family fosfomycin resistance bacillithiol transferase core AMR AMR FOSFOMYCIN FOSFOMYCIN BLASTX 139 139 100.0 98.56 139 WP_000920239.1 FosB/FosD family fosfomycin resistance bacillithiol transferase SRR13967231_contigs SRR13967231_contigs.fa nucleotide SRR13967231_contig00003 119717 121072 + glpT_A100V Staphylococcus aureus fosfomycin resistant GlpT core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 452 452 100.0 99.78 452 WP_001010111.1 glycerol-3-phosphate transporter GlpT SRR13967231_contigs SRR13967231_contigs.fa nucleotide SRR13967231_contig00003 346631 347980 - tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100293.1 tetracycline efflux MFS transporter Tet(38) SRR13967231_contigs SRR13967231_contigs.fa nucleotide SRR13967231_contig00007 37098 38360 - murA_E291D Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13967231_contigs SRR13967231_contigs.fa nucleotide SRR13967231_contig00007 37098 38360 - murA_T396N Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13967734_contigs SRR13967734_contigs.fa nucleotide SRR13967734_contig00003 137936 140596 + gyrA_S84L Staphylococcus aureus quinolone resistant GyrA core AMR POINT QUINOLONE QUINOLONE POINTX 887 887 100.0 99.77 887 WP_000819084.1 DNA gyrase subunit A GyrA SRR13967734_contigs SRR13967734_contigs.fa nucleotide SRR13967734_contig00003 170668 172671 - mecA PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA core AMR AMR BETA-LACTAM METHICILLIN EXACTX 668 668 100.0 100.0 668 WP_000721309.1 PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA SRR13967734_contigs SRR13967734_contigs.fa nucleotide SRR13967734_contig00003 172771 173745 + mecR1 beta-lactam sensor/signal transducer MecR1 core AMR AMR BETA-LACTAM METHICILLIN PARTIALX 325 585 55.56 100.0 325 WP_000952923.1 beta-lactam sensor/signal transducer MecR1 SRR13967734_contigs SRR13967734_contigs.fa nucleotide SRR13967734_contig00005 99303 99779 + dfrB_A135T Staphylococcus aureus trimethoprim resistant DfrB core AMR POINT TRIMETHOPRIM TRIMETHOPRIM POINTX 159 159 100.0 98.11 159 WP_000175752.1 dihydrofolate reductase DfrB SRR13967734_contigs SRR13967734_contigs.fa nucleotide SRR13967734_contig00012 47615 50014 + parC_S80F Staphylococcus aureus quinolone resistant ParC core AMR POINT QUINOLONE QUINOLONE POINTX 800 800 100.0 99.12 800 WP_001289586.1 DNA topoisomerase IV subunit A ParC SRR13967734_contigs SRR13967734_contigs.fa nucleotide SRR13967734_contig00020 28323 29672 + tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100293.1 tetracycline efflux MFS transporter Tet(38) SRR13967734_contigs SRR13967734_contigs.fa nucleotide SRR13967734_contig00032 13965 14342 - blaI penicillinase repressor BlaI core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 126 126 100.0 96.03 126 WP_001284656.1 penicillinase repressor BlaI SRR13967734_contigs SRR13967734_contigs.fa nucleotide SRR13967734_contig00032 16196 17038 + blaZ penicillin-hydrolyzing class A beta-lactamase BlaZ core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 281 281 100.0 94.66 281 WP_000733281.1 penicillin-hydrolyzing class A beta-lactamase BlaZ SRR13967111_contigs SRR13967111_contigs.fa nucleotide SRR13967111_contig00001 364248 364625 - blaI penicillinase repressor BlaI core AMR AMR BETA-LACTAM BETA-LACTAM EXACTX 126 126 100.0 100.0 126 WP_001284656.1 penicillinase repressor BlaI SRR13967111_contigs SRR13967111_contigs.fa nucleotide SRR13967111_contig00001 364618 366372 - blaR1 beta-lactam sensor/signal transducer BlaR1 core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 585 585 100.0 99.83 585 WP_001096376.1 beta-lactam sensor/signal transducer BlaR1 SRR13967111_contigs SRR13967111_contigs.fa nucleotide SRR13967111_contig00001 366479 367321 + blaPC1 BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1 core AMR AMR BETA-LACTAM BETA-LACTAM ALLELEX 281 281 100.0 100.0 281 WP_000733283.1 BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1 SRR13967111_contigs SRR13967111_contigs.fa nucleotide SRR13967111_contig00002 196614 197963 - tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100293.1 tetracycline efflux MFS transporter Tet(38) SRR13967111_contigs SRR13967111_contigs.fa nucleotide SRR13967111_contig00007 54948 55364 - fosB FosB/FosD family fosfomycin resistance bacillithiol transferase core AMR AMR FOSFOMYCIN FOSFOMYCIN BLASTX 139 139 100.0 99.28 139 WP_000920239.1 FosB/FosD family fosfomycin resistance bacillithiol transferase SRR13967111_contigs SRR13967111_contigs.fa nucleotide SRR13967111_contig00013 38315 39577 - murA_D278E Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13967111_contigs SRR13967111_contigs.fa nucleotide SRR13967111_contig00013 38315 39577 - murA_E291D Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13967111_contigs SRR13967111_contigs.fa nucleotide SRR13967111_contig00026 7192 8547 - glpT_A100V Staphylococcus aureus fosfomycin resistant GlpT core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 452 452 100.0 99.56 452 WP_001010111.1 glycerol-3-phosphate transporter GlpT SRR13967111_contigs SRR13967111_contigs.fa nucleotide SRR13967111_contig00026 7192 8547 - glpT_V213I Staphylococcus aureus fosfomycin resistant GlpT core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 452 452 100.0 99.56 452 WP_001010111.1 glycerol-3-phosphate transporter GlpT SRR13967871_contigs SRR13967871_contigs.fa nucleotide SRR13967871_contig00001 249 665 + fosB FosB/FosD family fosfomycin resistance bacillithiol transferase core AMR AMR FOSFOMYCIN FOSFOMYCIN EXACTX 139 139 100.0 100.0 139 WP_000920239.1 FosB/FosD family fosfomycin resistance bacillithiol transferase SRR13967871_contigs SRR13967871_contigs.fa nucleotide SRR13967871_contig00001 467406 468041 + fusC fusidic acid resistance EF-G-binding protein FusC core AMR AMR FUSIDIC ACID FUSIDIC ACID ALLELEX 212 212 100.0 100.0 212 WP_001033157.1 fusidic acid resistance EF-G-binding protein FusC SRR13967871_contigs SRR13967871_contigs.fa nucleotide SRR13967871_contig00001 540062 541411 + tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100300.1 tetracycline efflux MFS transporter Tet(38) SRR13967871_contigs SRR13967871_contigs.fa nucleotide SRR13967871_contig00004 107295 108137 - blaZ penicillin-hydrolyzing class A beta-lactamase BlaZ core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 281 281 100.0 94.31 281 WP_000733281.1 penicillin-hydrolyzing class A beta-lactamase BlaZ SRR13967871_contigs SRR13967871_contigs.fa nucleotide SRR13967871_contig00004 109991 110368 + blaI penicillinase repressor BlaI core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 126 126 100.0 96.03 126 WP_001284656.1 penicillinase repressor BlaI SRR13967871_contigs SRR13967871_contigs.fa nucleotide SRR13967871_contig00014 8851 10227 + tet(K) tetracycline efflux MFS transporter Tet(K) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 459 459 100.0 100.0 459 WP_000492283.1 tetracycline efflux MFS transporter Tet(K) SRR13967871_contigs SRR13967871_contigs.fa nucleotide SRR13967871_contig00017 1473 1793 - qacC quaternary ammonium compound efflux SMR transporter QacC core STRESS BIOCIDE QUATERNARY AMMONIUM QUATERNARY AMMONIUM EXACTX 107 107 100.0 100.0 107 WP_001146389.1 quaternary ammonium compound efflux SMR transporter QacC SRR13968747_contigs SRR13968747_contigs.fa nucleotide SRR13968747_contig00003 69230 69607 - blaI penicillinase repressor BlaI core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 126 126 100.0 96.03 126 WP_001284656.1 penicillinase repressor BlaI SRR13968747_contigs SRR13968747_contigs.fa nucleotide SRR13968747_contig00003 71461 72303 + blaZ penicillin-hydrolyzing class A beta-lactamase BlaZ core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 281 281 100.0 94.66 281 WP_000733281.1 penicillin-hydrolyzing class A beta-lactamase BlaZ SRR13968747_contigs SRR13968747_contigs.fa nucleotide SRR13968747_contig00009 48894 51293 + parC_S80F Staphylococcus aureus quinolone resistant ParC core AMR POINT QUINOLONE QUINOLONE POINTX 800 800 100.0 99.12 800 WP_001289586.1 DNA topoisomerase IV subunit A ParC SRR13968747_contigs SRR13968747_contigs.fa nucleotide SRR13968747_contig00009 138469 138945 - dfrB_A135T Staphylococcus aureus trimethoprim resistant DfrB core AMR POINT TRIMETHOPRIM TRIMETHOPRIM POINTX 159 159 100.0 98.11 159 WP_000175752.1 dihydrofolate reductase DfrB SRR13968747_contigs SRR13968747_contigs.fa nucleotide SRR13968747_contig00015 13084 15744 + gyrA_S84L Staphylococcus aureus quinolone resistant GyrA core AMR POINT QUINOLONE QUINOLONE POINTX 887 887 100.0 99.77 887 WP_000819084.1 DNA gyrase subunit A GyrA SRR13968747_contigs SRR13968747_contigs.fa nucleotide SRR13968747_contig00016 44476 45591 + tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE PARTIALX 372 450 82.67 100.0 372 WP_001100293.1 tetracycline efflux MFS transporter Tet(38) SRR13968747_contigs SRR13968747_contigs.fa nucleotide SRR13968747_contig00027 886 1617 + erm(C) 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C) core AMR AMR LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN EXACTX 244 244 100.0 100.0 244 WP_001003263.1 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C) SRR13967389_contigs SRR13967389_contigs.fa nucleotide SRR13967389_contig00001 343598 344947 + tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100299.1 tetracycline efflux MFS transporter Tet(38) SRR13967389_contigs SRR13967389_contigs.fa nucleotide SRR13967389_contig00004 153522 153938 + fosB FosB/FosD family fosfomycin resistance bacillithiol transferase core AMR AMR FOSFOMYCIN FOSFOMYCIN EXACTX 139 139 100.0 100.0 139 WP_000920239.1 FosB/FosD family fosfomycin resistance bacillithiol transferase SRR13967757_contigs SRR13967757_contigs.fa nucleotide SRR13967757_contig00001 95363 95779 + fosB FosB/FosD family fosfomycin resistance bacillithiol transferase core AMR AMR FOSFOMYCIN FOSFOMYCIN BLASTX 139 139 100.0 98.56 139 WP_000920239.1 FosB/FosD family fosfomycin resistance bacillithiol transferase SRR13967757_contigs SRR13967757_contigs.fa nucleotide SRR13967757_contig00002 37450 38805 + glpT_A100V Staphylococcus aureus fosfomycin resistant GlpT core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 452 452 100.0 99.56 452 WP_001010111.1 glycerol-3-phosphate transporter GlpT SRR13967757_contigs SRR13967757_contigs.fa nucleotide SRR13967757_contig00002 37450 38805 + glpT_L27F Staphylococcus aureus fosfomycin resistant GlpT core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 452 452 100.0 99.56 452 WP_001010111.1 glycerol-3-phosphate transporter GlpT SRR13967757_contigs SRR13967757_contigs.fa nucleotide SRR13967757_contig00002 264267 265616 - tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100293.1 tetracycline efflux MFS transporter Tet(38) SRR13967757_contigs SRR13967757_contigs.fa nucleotide SRR13967757_contig00006 69455 69832 - blaI penicillinase repressor BlaI core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 126 126 100.0 96.03 126 WP_001284656.1 penicillinase repressor BlaI SRR13967757_contigs SRR13967757_contigs.fa nucleotide SRR13967757_contig00006 71686 72528 + blaZ penicillin-hydrolyzing class A beta-lactamase BlaZ core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 281 281 100.0 94.66 281 WP_000733281.1 penicillin-hydrolyzing class A beta-lactamase BlaZ SRR13967757_contigs SRR13967757_contigs.fa nucleotide SRR13967757_contig00009 71226 72488 + murA_E291D Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13967757_contigs SRR13967757_contigs.fa nucleotide SRR13967757_contig00009 71226 72488 + murA_T396N Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13967757_contigs SRR13967757_contigs.fa nucleotide SRR13967757_contig00013 19697 20335 - fusB fusidic acid resistance EF-G-binding protein FusB core AMR AMR FUSIDIC ACID FUSIDIC ACID EXACTX 213 213 100.0 100.0 213 WP_000855537.1 fusidic acid resistance EF-G-binding protein FusB SRR13967377_contigs SRR13967377_contigs.fa nucleotide SRR13967377_contig00001 343194 344543 + tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100299.1 tetracycline efflux MFS transporter Tet(38) SRR13967377_contigs SRR13967377_contigs.fa nucleotide SRR13967377_contig00003 153520 153936 + fosB FosB/FosD family fosfomycin resistance bacillithiol transferase core AMR AMR FOSFOMYCIN FOSFOMYCIN EXACTX 139 139 100.0 100.0 139 WP_000920239.1 FosB/FosD family fosfomycin resistance bacillithiol transferase SRR13967377_contigs SRR13967377_contigs.fa nucleotide SRR13967377_contig00007 67858 68235 - blaI penicillinase repressor BlaI core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 126 126 100.0 96.83 126 WP_001284656.1 penicillinase repressor BlaI SRR13967377_contigs SRR13967377_contigs.fa nucleotide SRR13967377_contig00007 70089 70931 + blaZ penicillin-hydrolyzing class A beta-lactamase BlaZ core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 281 281 100.0 94.66 281 WP_000733281.1 penicillin-hydrolyzing class A beta-lactamase BlaZ SRR13967535_contigs SRR13967535_contigs.fa nucleotide SRR13967535_contig00005 123025 124380 + glpT_A100V Staphylococcus aureus fosfomycin resistant GlpT core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 452 452 100.0 99.78 452 WP_001010111.1 glycerol-3-phosphate transporter GlpT SRR13967535_contigs SRR13967535_contigs.fa nucleotide SRR13967535_contig00006 103576 104925 - tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100293.1 tetracycline efflux MFS transporter Tet(38) SRR13967535_contigs SRR13967535_contigs.fa nucleotide SRR13967535_contig00011 67993 69255 + murA_E291D Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13967535_contigs SRR13967535_contigs.fa nucleotide SRR13967535_contig00011 67993 69255 + murA_T396N Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13968583_contigs SRR13968583_contigs.fa nucleotide SRR13968583_contig00001 363048 363425 - blaI penicillinase repressor BlaI core AMR AMR BETA-LACTAM BETA-LACTAM EXACTX 126 126 100.0 100.0 126 WP_001284656.1 penicillinase repressor BlaI SRR13968583_contigs SRR13968583_contigs.fa nucleotide SRR13968583_contig00001 363418 365172 - blaR1 beta-lactam sensor/signal transducer BlaR1 core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 585 585 100.0 99.83 585 WP_001096376.1 beta-lactam sensor/signal transducer BlaR1 SRR13968583_contigs SRR13968583_contigs.fa nucleotide SRR13968583_contig00001 365279 366121 + blaPC1 BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1 core AMR AMR BETA-LACTAM BETA-LACTAM ALLELEX 281 281 100.0 100.0 281 WP_000733283.1 BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1 SRR13968583_contigs SRR13968583_contigs.fa nucleotide SRR13968583_contig00002 34111 35466 + glpT_A100V Staphylococcus aureus fosfomycin resistant GlpT core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 452 452 100.0 99.56 452 WP_001010111.1 glycerol-3-phosphate transporter GlpT SRR13968583_contigs SRR13968583_contigs.fa nucleotide SRR13968583_contig00002 34111 35466 + glpT_V213I Staphylococcus aureus fosfomycin resistant GlpT core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 452 452 100.0 99.56 452 WP_001010111.1 glycerol-3-phosphate transporter GlpT SRR13968583_contigs SRR13968583_contigs.fa nucleotide SRR13968583_contig00002 259822 261171 - tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100293.1 tetracycline efflux MFS transporter Tet(38) SRR13968583_contigs SRR13968583_contigs.fa nucleotide SRR13968583_contig00008 95022 95438 + fosB FosB/FosD family fosfomycin resistance bacillithiol transferase core AMR AMR FOSFOMYCIN FOSFOMYCIN BLASTX 139 139 100.0 99.28 139 WP_000920239.1 FosB/FosD family fosfomycin resistance bacillithiol transferase SRR13968583_contigs SRR13968583_contigs.fa nucleotide SRR13968583_contig00012 45559 46821 + murA_D278E Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13968583_contigs SRR13968583_contigs.fa nucleotide SRR13968583_contig00012 45559 46821 + murA_E291D Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13968644_contigs SRR13968644_contigs.fa nucleotide SRR13968644_contig00007 48894 51293 + parC_S80F Staphylococcus aureus quinolone resistant ParC core AMR POINT QUINOLONE QUINOLONE POINTX 800 800 100.0 99.12 800 WP_001289586.1 DNA topoisomerase IV subunit A ParC SRR13968644_contigs SRR13968644_contigs.fa nucleotide SRR13968644_contig00007 138469 138945 - dfrB_A135T Staphylococcus aureus trimethoprim resistant DfrB core AMR POINT TRIMETHOPRIM TRIMETHOPRIM POINTX 159 159 100.0 98.11 159 WP_000175752.1 dihydrofolate reductase DfrB SRR13968644_contigs SRR13968644_contigs.fa nucleotide SRR13968644_contig00009 59607 60449 - blaZ penicillin-hydrolyzing class A beta-lactamase BlaZ core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 281 281 100.0 94.66 281 WP_000733281.1 penicillin-hydrolyzing class A beta-lactamase BlaZ SRR13968644_contigs SRR13968644_contigs.fa nucleotide SRR13968644_contig00009 62303 62680 + blaI penicillinase repressor BlaI core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 126 126 100.0 96.03 126 WP_001284656.1 penicillinase repressor BlaI SRR13968644_contigs SRR13968644_contigs.fa nucleotide SRR13968644_contig00015 38070 39044 - mecR1 beta-lactam sensor/signal transducer MecR1 core AMR AMR BETA-LACTAM METHICILLIN PARTIALX 325 585 55.56 100.0 325 WP_000952923.1 beta-lactam sensor/signal transducer MecR1 SRR13968644_contigs SRR13968644_contigs.fa nucleotide SRR13968644_contig00015 39144 41147 + mecA PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA core AMR AMR BETA-LACTAM METHICILLIN BLASTX 668 668 100.0 99.85 668 WP_000721309.1 PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA SRR13968644_contigs SRR13968644_contigs.fa nucleotide SRR13968644_contig00015 71219 73879 - gyrA_S84L Staphylococcus aureus quinolone resistant GyrA core AMR POINT QUINOLONE QUINOLONE POINTX 887 887 100.0 99.77 887 WP_000819084.1 DNA gyrase subunit A GyrA SRR13968644_contigs SRR13968644_contigs.fa nucleotide SRR13968644_contig00017 44222 45571 + tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100293.1 tetracycline efflux MFS transporter Tet(38) SRR13968370_contigs SRR13968370_contigs.fa nucleotide SRR13968370_contig00002 105746 107095 - tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100293.1 tetracycline efflux MFS transporter Tet(38) SRR13968370_contigs SRR13968370_contigs.fa nucleotide SRR13968370_contig00005 27640 28995 + glpT_A100V Staphylococcus aureus fosfomycin resistant GlpT core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 452 452 100.0 99.78 452 WP_001010111.1 glycerol-3-phosphate transporter GlpT SRR13968370_contigs SRR13968370_contigs.fa nucleotide SRR13968370_contig00017 1159 2421 - murA_E291D Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13968370_contigs SRR13968370_contigs.fa nucleotide SRR13968370_contig00017 1159 2421 - murA_T396N Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13968370_contigs SRR13968370_contigs.fa nucleotide SRR13968370_contig00028 18032 18409 - blaI penicillinase repressor BlaI core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 126 126 100.0 98.41 126 WP_001284656.1 penicillinase repressor BlaI SRR13968370_contigs SRR13968370_contigs.fa nucleotide SRR13968370_contig00028 18402 20156 - blaR1 beta-lactam sensor/signal transducer BlaR1 core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 585 585 100.0 95.38 585 WP_001096386.1 beta-lactam sensor/signal transducer BlaR1 SRR13968370_contigs SRR13968370_contigs.fa nucleotide SRR13968370_contig00028 20263 21105 + blaZ penicillin-hydrolyzing class A beta-lactamase BlaZ core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 281 281 100.0 99.64 281 WP_000733287.1 penicillin-hydrolyzing class A beta-lactamase BlaZ SRR13968370_contigs SRR13968370_contigs.fa nucleotide SRR13968370_contig00039 1232 1552 + qacC quaternary ammonium compound efflux SMR transporter QacC core STRESS BIOCIDE QUATERNARY AMMONIUM QUATERNARY AMMONIUM EXACTX 107 107 100.0 100.0 107 WP_001146389.1 quaternary ammonium compound efflux SMR transporter QacC SRR13968234_contigs SRR13968234_contigs.fa nucleotide SRR13968234_contig00003 154196 155545 + tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100293.1 tetracycline efflux MFS transporter Tet(38) SRR13968234_contigs SRR13968234_contigs.fa nucleotide SRR13968234_contig00008 118873 120228 - glpT_A100V Staphylococcus aureus fosfomycin resistant GlpT core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 452 452 100.0 99.78 452 WP_001010111.1 glycerol-3-phosphate transporter GlpT SRR13968234_contigs SRR13968234_contigs.fa nucleotide SRR13968234_contig00010 37473 38735 - murA_E291D Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13968234_contigs SRR13968234_contigs.fa nucleotide SRR13968234_contig00010 37473 38735 - murA_T396N Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13967175_contigs SRR13967175_contigs.fa nucleotide SRR13967175_contig00001 121851 122693 - blaPC1 BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1 core AMR AMR BETA-LACTAM BETA-LACTAM ALLELEX 281 281 100.0 100.0 281 WP_000733283.1 BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1 SRR13967175_contigs SRR13967175_contigs.fa nucleotide SRR13967175_contig00001 122800 124554 + blaR1 beta-lactam sensor/signal transducer BlaR1 core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 585 585 100.0 99.83 585 WP_001096376.1 beta-lactam sensor/signal transducer BlaR1 SRR13967175_contigs SRR13967175_contigs.fa nucleotide SRR13967175_contig00001 124547 124924 + blaI penicillinase repressor BlaI core AMR AMR BETA-LACTAM BETA-LACTAM EXACTX 126 126 100.0 100.0 126 WP_001284656.1 penicillinase repressor BlaI SRR13967175_contigs SRR13967175_contigs.fa nucleotide SRR13967175_contig00002 217388 218737 - tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100293.1 tetracycline efflux MFS transporter Tet(38) SRR13967175_contigs SRR13967175_contigs.fa nucleotide SRR13967175_contig00006 54947 55363 - fosB FosB/FosD family fosfomycin resistance bacillithiol transferase core AMR AMR FOSFOMYCIN FOSFOMYCIN BLASTX 139 139 100.0 99.28 139 WP_000920239.1 FosB/FosD family fosfomycin resistance bacillithiol transferase SRR13967175_contigs SRR13967175_contigs.fa nucleotide SRR13967175_contig00013 45557 46819 + murA_D278E Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13967175_contigs SRR13967175_contigs.fa nucleotide SRR13967175_contig00013 45557 46819 + murA_E291D Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13967175_contigs SRR13967175_contigs.fa nucleotide SRR13967175_contig00021 7192 8547 - glpT_A100V Staphylococcus aureus fosfomycin resistant GlpT core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 452 452 100.0 99.56 452 WP_001010111.1 glycerol-3-phosphate transporter GlpT SRR13967175_contigs SRR13967175_contigs.fa nucleotide SRR13967175_contig00021 7192 8547 - glpT_V213I Staphylococcus aureus fosfomycin resistant GlpT core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 452 452 100.0 99.56 452 WP_001010111.1 glycerol-3-phosphate transporter GlpT SRR13968362_contigs SRR13968362_contigs.fa nucleotide SRR13968362_contig00001 397933 398310 - blaI penicillinase repressor BlaI core AMR AMR BETA-LACTAM BETA-LACTAM EXACTX 126 126 100.0 100.0 126 WP_001284656.1 penicillinase repressor BlaI SRR13968362_contigs SRR13968362_contigs.fa nucleotide SRR13968362_contig00001 398303 400057 - blaR1 beta-lactam sensor/signal transducer BlaR1 core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 585 585 100.0 99.83 585 WP_001096376.1 beta-lactam sensor/signal transducer BlaR1 SRR13968362_contigs SRR13968362_contigs.fa nucleotide SRR13968362_contig00001 400164 401006 + blaPC1 BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1 core AMR AMR BETA-LACTAM BETA-LACTAM ALLELEX 281 281 100.0 100.0 281 WP_000733283.1 BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1 SRR13968362_contigs SRR13968362_contigs.fa nucleotide SRR13968362_contig00002 60583 61932 + tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100293.1 tetracycline efflux MFS transporter Tet(38) SRR13968362_contigs SRR13968362_contigs.fa nucleotide SRR13968362_contig00002 286451 287806 - glpT_A100V Staphylococcus aureus fosfomycin resistant GlpT core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 452 452 100.0 99.34 452 WP_001010111.1 glycerol-3-phosphate transporter GlpT SRR13968362_contigs SRR13968362_contigs.fa nucleotide SRR13968362_contig00002 286451 287806 - glpT_V213I Staphylococcus aureus fosfomycin resistant GlpT core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 452 452 100.0 99.34 452 WP_001010111.1 glycerol-3-phosphate transporter GlpT SRR13968362_contigs SRR13968362_contigs.fa nucleotide SRR13968362_contig00008 95036 95452 + fosB FosB/FosD family fosfomycin resistance bacillithiol transferase core AMR AMR FOSFOMYCIN FOSFOMYCIN BLASTX 139 139 100.0 99.28 139 WP_000920239.1 FosB/FosD family fosfomycin resistance bacillithiol transferase SRR13968362_contigs SRR13968362_contigs.fa nucleotide SRR13968362_contig00012 45560 46822 + murA_D278E Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13968362_contigs SRR13968362_contigs.fa nucleotide SRR13968362_contig00012 45560 46822 + murA_E291D Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13968656_contigs SRR13968656_contigs.fa nucleotide SRR13968656_contig00001 60540 61889 + tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100293.1 tetracycline efflux MFS transporter Tet(38) SRR13968656_contigs SRR13968656_contigs.fa nucleotide SRR13968656_contig00001 285734 287089 - glpT_A100V Staphylococcus aureus fosfomycin resistant GlpT core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 452 452 100.0 99.56 452 WP_001010111.1 glycerol-3-phosphate transporter GlpT SRR13968656_contigs SRR13968656_contigs.fa nucleotide SRR13968656_contig00001 285734 287089 - glpT_V213I Staphylococcus aureus fosfomycin resistant GlpT core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 452 452 100.0 99.56 452 WP_001010111.1 glycerol-3-phosphate transporter GlpT SRR13968656_contigs SRR13968656_contigs.fa nucleotide SRR13968656_contig00003 121792 122634 - blaPC1 BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1 core AMR AMR BETA-LACTAM BETA-LACTAM ALLELEX 281 281 100.0 100.0 281 WP_000733283.1 BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1 SRR13968656_contigs SRR13968656_contigs.fa nucleotide SRR13968656_contig00003 123088 124494 + blaR1 beta-lactam sensor/signal transducer BlaR1 core AMR AMR BETA-LACTAM BETA-LACTAM INTERNAL_STOP 469 585 79.83 93.21 471 WP_001096376.1 beta-lactam sensor/signal transducer BlaR1 SRR13968656_contigs SRR13968656_contigs.fa nucleotide SRR13968656_contig00003 124581 124865 + blaI penicillinase repressor BlaI core AMR AMR BETA-LACTAM BETA-LACTAM PARTIALX 95 126 75.4 95.79 95 WP_001284656.1 penicillinase repressor BlaI SRR13968656_contigs SRR13968656_contigs.fa nucleotide SRR13968656_contig00007 110924 113575 + gyrA_S84L Staphylococcus aureus quinolone resistant GyrA core AMR POINT QUINOLONE QUINOLONE POINTX 884 887 100.0 98.87 887 WP_000819084.1 DNA gyrase subunit A GyrA SRR13968656_contigs SRR13968656_contigs.fa nucleotide SRR13968656_contig00007 144087 144488 - bleO bleomycin binding protein core AMR AMR BLEOMYCIN BLEOMYCIN EXACTX 134 134 100.0 100.0 134 WP_001242578.1 bleomycin binding protein SRR13968656_contigs SRR13968656_contigs.fa nucleotide SRR13968656_contig00007 144708 145466 - aadD1 aminoglycoside O-nucleotidyltransferase ANT(4')-Ia core AMR AMR AMINOGLYCOSIDE KANAMYCIN/TOBRAMYCIN EXACTX 253 253 100.0 100.0 253 WP_001014230.1 aminoglycoside O-nucleotidyltransferase ANT(4')-Ia SRR13968656_contigs SRR13968656_contigs.fa nucleotide SRR13968656_contig00007 148841 150844 - mecA PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA core AMR AMR BETA-LACTAM METHICILLIN EXACTX 668 668 100.0 100.0 668 WP_000721310.1 PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA SRR13968656_contigs SRR13968656_contigs.fa nucleotide SRR13968656_contig00007 150944 152698 + mecR1 beta-lactam sensor/signal transducer MecR1 core AMR AMR BETA-LACTAM METHICILLIN EXACTX 585 585 100.0 100.0 585 WP_000952923.1 beta-lactam sensor/signal transducer MecR1 SRR13968656_contigs SRR13968656_contigs.fa nucleotide SRR13968656_contig00007 152701 153069 + mecI mecA-type methicillin resistance repressor MecI core AMR AMR BETA-LACTAM METHICILLIN INTERNAL_STOP 123 123 100.0 99.19 123 WP_000369214.1 mecA-type methicillin resistance repressor MecI SRR13968656_contigs SRR13968656_contigs.fa nucleotide SRR13968656_contig00009 95091 95507 + fosB FosB/FosD family fosfomycin resistance bacillithiol transferase core AMR AMR FOSFOMYCIN FOSFOMYCIN BLASTX 139 139 100.0 99.28 139 WP_000920239.1 FosB/FosD family fosfomycin resistance bacillithiol transferase SRR13968656_contigs SRR13968656_contigs.fa nucleotide SRR13968656_contig00011 45557 46819 + murA_D278E Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13968656_contigs SRR13968656_contigs.fa nucleotide SRR13968656_contig00011 45557 46819 + murA_E291D Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13968656_contigs SRR13968656_contigs.fa nucleotide SRR13968656_contig00025 9967 12366 + parC_S80F Staphylococcus aureus quinolone resistant ParC core AMR POINT QUINOLONE QUINOLONE POINTX 800 800 100.0 99.88 800 WP_001289586.1 DNA topoisomerase IV subunit A ParC SRR13968656_contigs SRR13968656_contigs.fa nucleotide SRR13968656_contig00031 1425 2153 + erm(A) 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A) core AMR AMR LINCOSAMIDE/MACROLIDE AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN EXACTX 243 243 100.0 100.0 243 WP_001072201.1 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A) SRR13968656_contigs SRR13968656_contigs.fa nucleotide SRR13968656_contig00031 2285 3064 - ant(9)-Ia aminoglycoside nucleotidyltransferase ANT(9)-Ia core AMR AMR AMINOGLYCOSIDE SPECTINOMYCIN EXACTX 260 260 100.0 100.0 260 WP_000067268.1 aminoglycoside nucleotidyltransferase ANT(9)-Ia SRR13968656_contigs SRR13968656_contigs.fa nucleotide SRR13968656_contig00034 463 1839 + tet(K) tetracycline efflux MFS transporter Tet(K) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 459 459 100.0 100.0 459 WP_000492283.1 tetracycline efflux MFS transporter Tet(K) SRR13967907_contigs SRR13967907_contigs.fa nucleotide SRR13967907_contig00002 197213 198562 + tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100299.1 tetracycline efflux MFS transporter Tet(38) SRR13967907_contigs SRR13967907_contigs.fa nucleotide SRR13967907_contig00005 153578 153994 + fosB FosB/FosD family fosfomycin resistance bacillithiol transferase core AMR AMR FOSFOMYCIN FOSFOMYCIN EXACTX 139 139 100.0 100.0 139 WP_000920239.1 FosB/FosD family fosfomycin resistance bacillithiol transferase SRR13967907_contigs SRR13967907_contigs.fa nucleotide SRR13967907_contig00015 4613 5455 - blaZ penicillin-hydrolyzing class A beta-lactamase BlaZ core AMR AMR BETA-LACTAM BETA-LACTAM EXACTX 281 281 100.0 100.0 281 WP_000733281.1 penicillin-hydrolyzing class A beta-lactamase BlaZ SRR13967907_contigs SRR13967907_contigs.fa nucleotide SRR13967907_contig00015 5996 7315 + blaR1 beta-lactam sensor/signal transducer BlaR1 core AMR AMR BETA-LACTAM BETA-LACTAM INTERNAL_STOP 440 585 75.56 91.63 442 WP_001096376.1 beta-lactam sensor/signal transducer BlaR1 SRR13967907_contigs SRR13967907_contigs.fa nucleotide SRR13967907_contig00015 7308 7685 + blaI penicillinase repressor BlaI core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 126 126 100.0 99.21 126 WP_001284656.1 penicillinase repressor BlaI SRR13968133_contigs SRR13968133_contigs.fa nucleotide SRR13968133_contig00001 502426 503775 + tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100299.1 tetracycline efflux MFS transporter Tet(38) SRR13968133_contigs SRR13968133_contigs.fa nucleotide SRR13968133_contig00011 27589 28005 + fosB FosB/FosD family fosfomycin resistance bacillithiol transferase core AMR AMR FOSFOMYCIN FOSFOMYCIN EXACTX 139 139 100.0 100.0 139 WP_000920239.1 FosB/FosD family fosfomycin resistance bacillithiol transferase SRR13967297_contigs SRR13967297_contigs.fa nucleotide SRR13967297_contig00001 349475 350824 + tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100300.1 tetracycline efflux MFS transporter Tet(38) SRR13967297_contigs SRR13967297_contigs.fa nucleotide SRR13967297_contig00013 21946 22257 - fosB FosB/FosD family fosfomycin resistance bacillithiol transferase core AMR AMR FOSFOMYCIN FOSFOMYCIN PARTIALX 104 139 74.82 99.04 104 WP_000920239.1 FosB/FosD family fosfomycin resistance bacillithiol transferase SRR13967297_contigs SRR13967297_contigs.fa nucleotide SRR13967297_contig00014 10406 10783 - blaI penicillinase repressor BlaI core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 126 126 100.0 99.21 126 WP_001284656.1 penicillinase repressor BlaI SRR13967297_contigs SRR13967297_contigs.fa nucleotide SRR13967297_contig00014 10776 12530 - blaR1 beta-lactam sensor/signal transducer BlaR1 core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 585 585 100.0 95.56 585 WP_001096386.1 beta-lactam sensor/signal transducer BlaR1 SRR13967297_contigs SRR13967297_contigs.fa nucleotide SRR13967297_contig00014 12637 13479 + blaZ penicillin-hydrolyzing class A beta-lactamase BlaZ core AMR AMR BETA-LACTAM BETA-LACTAM EXACTX 281 281 100.0 100.0 281 WP_000733289.1 penicillin-hydrolyzing class A beta-lactamase BlaZ SRR13967683_contigs SRR13967683_contigs.fa nucleotide SRR13967683_contig00003 108066 109415 - tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100293.1 tetracycline efflux MFS transporter Tet(38) SRR13967683_contigs SRR13967683_contigs.fa nucleotide SRR13967683_contig00006 53787 54164 - blaI penicillinase repressor BlaI core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 126 126 100.0 96.03 126 WP_001284656.1 penicillinase repressor BlaI SRR13967683_contigs SRR13967683_contigs.fa nucleotide SRR13967683_contig00006 56018 56860 + blaZ penicillin-hydrolyzing class A beta-lactamase BlaZ core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 281 281 100.0 94.31 281 WP_000733281.1 penicillin-hydrolyzing class A beta-lactamase BlaZ SRR13967683_contigs SRR13967683_contigs.fa nucleotide SRR13967683_contig00011 37243 38505 - murA_E291D Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13967683_contigs SRR13967683_contigs.fa nucleotide SRR13967683_contig00011 37243 38505 - murA_T396N Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13967683_contigs SRR13967683_contigs.fa nucleotide SRR13967683_contig00016 34433 34849 + fosB FosB/FosD family fosfomycin resistance bacillithiol transferase core AMR AMR FOSFOMYCIN FOSFOMYCIN BLASTX 139 139 100.0 98.56 139 WP_000920239.1 FosB/FosD family fosfomycin resistance bacillithiol transferase SRR13967683_contigs SRR13967683_contigs.fa nucleotide SRR13967683_contig00020 6940 8295 - glpT_A100V Staphylococcus aureus fosfomycin resistant GlpT core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 452 452 100.0 99.56 452 WP_001010111.1 glycerol-3-phosphate transporter GlpT SRR13967683_contigs SRR13967683_contigs.fa nucleotide SRR13967683_contig00020 6940 8295 - glpT_L27F Staphylococcus aureus fosfomycin resistant GlpT core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 452 452 100.0 99.56 452 WP_001010111.1 glycerol-3-phosphate transporter GlpT SRR13967422_contigs SRR13967422_contigs.fa nucleotide SRR13967422_contig00004 127870 130530 + gyrA_S84L Staphylococcus aureus quinolone resistant GyrA core AMR POINT QUINOLONE QUINOLONE POINTX 887 887 100.0 99.77 887 WP_000819084.1 DNA gyrase subunit A GyrA SRR13967422_contigs SRR13967422_contigs.fa nucleotide SRR13967422_contig00004 160602 162605 - mecA PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA core AMR AMR BETA-LACTAM METHICILLIN EXACTX 668 668 100.0 100.0 668 WP_000721309.1 PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA SRR13967422_contigs SRR13967422_contigs.fa nucleotide SRR13967422_contig00004 162705 163679 + mecR1 beta-lactam sensor/signal transducer MecR1 core AMR AMR BETA-LACTAM METHICILLIN PARTIALX 325 585 55.56 100.0 325 WP_000952923.1 beta-lactam sensor/signal transducer MecR1 SRR13967422_contigs SRR13967422_contigs.fa nucleotide SRR13967422_contig00011 510 887 - blaI penicillinase repressor BlaI core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 126 126 100.0 96.03 126 WP_001284656.1 penicillinase repressor BlaI SRR13967422_contigs SRR13967422_contigs.fa nucleotide SRR13967422_contig00011 2741 3583 + blaZ penicillin-hydrolyzing class A beta-lactamase BlaZ core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 281 281 100.0 94.66 281 WP_000733281.1 penicillin-hydrolyzing class A beta-lactamase BlaZ SRR13967422_contigs SRR13967422_contigs.fa nucleotide SRR13967422_contig00013 48893 51292 + parC_S80F Staphylococcus aureus quinolone resistant ParC core AMR POINT QUINOLONE QUINOLONE POINTX 800 800 100.0 99.12 800 WP_001289586.1 DNA topoisomerase IV subunit A ParC SRR13967422_contigs SRR13967422_contigs.fa nucleotide SRR13967422_contig00014 63684 64160 - dfrB_A135T Staphylococcus aureus trimethoprim resistant DfrB core AMR POINT TRIMETHOPRIM TRIMETHOPRIM POINTX 159 159 100.0 98.11 159 WP_000175752.1 dihydrofolate reductase DfrB SRR13967422_contigs SRR13967422_contigs.fa nucleotide SRR13967422_contig00016 44222 45571 + tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100293.1 tetracycline efflux MFS transporter Tet(38) SRR13967047_contigs SRR13967047_contigs.fa nucleotide SRR13967047_contig00001 134449 135804 + glpT_A100V Staphylococcus aureus fosfomycin resistant GlpT core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 452 452 100.0 99.56 452 WP_001010111.1 glycerol-3-phosphate transporter GlpT SRR13967047_contigs SRR13967047_contigs.fa nucleotide SRR13967047_contig00001 134449 135804 + glpT_V213I Staphylococcus aureus fosfomycin resistant GlpT core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 452 452 100.0 99.56 452 WP_001010111.1 glycerol-3-phosphate transporter GlpT SRR13967047_contigs SRR13967047_contigs.fa nucleotide SRR13967047_contig00010 170 547 - blaI penicillinase repressor BlaI core AMR AMR BETA-LACTAM BETA-LACTAM EXACTX 126 126 100.0 100.0 126 WP_001284656.1 penicillinase repressor BlaI SRR13967047_contigs SRR13967047_contigs.fa nucleotide SRR13967047_contig00010 540 2294 - blaR1 beta-lactam sensor/signal transducer BlaR1 core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 585 585 100.0 99.83 585 WP_001096376.1 beta-lactam sensor/signal transducer BlaR1 SRR13967047_contigs SRR13967047_contigs.fa nucleotide SRR13967047_contig00010 2401 3243 + blaPC1 BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1 core AMR AMR BETA-LACTAM BETA-LACTAM ALLELEX 281 281 100.0 100.0 281 WP_000733283.1 BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1 SRR13967047_contigs SRR13967047_contigs.fa nucleotide SRR13967047_contig00011 27375 28724 - tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100293.1 tetracycline efflux MFS transporter Tet(38) SRR13967047_contigs SRR13967047_contigs.fa nucleotide SRR13967047_contig00013 54903 55319 - fosB FosB/FosD family fosfomycin resistance bacillithiol transferase core AMR AMR FOSFOMYCIN FOSFOMYCIN BLASTX 139 139 100.0 99.28 139 WP_000920239.1 FosB/FosD family fosfomycin resistance bacillithiol transferase SRR13967047_contigs SRR13967047_contigs.fa nucleotide SRR13967047_contig00021 36802 38064 + murA_D278E Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13967047_contigs SRR13967047_contigs.fa nucleotide SRR13967047_contig00021 36802 38064 + murA_E291D Staphylococcus aureus fosfomycin resistant MurA core AMR POINT FOSFOMYCIN FOSFOMYCIN POINTX 421 421 100.0 99.52 421 WP_000358006.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA SRR13967047_contigs SRR13967047_contigs.fa nucleotide SRR13967047_contig00035 1400 2128 + erm(A) 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A) core AMR AMR LINCOSAMIDE/MACROLIDE AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN EXACTX 243 243 100.0 100.0 243 WP_001072201.1 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A) SRR13967047_contigs SRR13967047_contigs.fa nucleotide SRR13967047_contig00035 2260 3039 - ant(9)-Ia aminoglycoside nucleotidyltransferase ANT(9)-Ia core AMR AMR AMINOGLYCOSIDE SPECTINOMYCIN EXACTX 260 260 100.0 100.0 260 WP_000067268.1 aminoglycoside nucleotidyltransferase ANT(9)-Ia SRR13967215_contigs SRR13967215_contigs.fa nucleotide SRR13967215_contig00001 159750 161099 - tet(38) tetracycline efflux MFS transporter Tet(38) core AMR AMR TETRACYCLINE TETRACYCLINE EXACTX 450 450 100.0 100.0 450 WP_001100294.1 tetracycline efflux MFS transporter Tet(38) SRR13967215_contigs SRR13967215_contigs.fa nucleotide SRR13967215_contig00002 3130 3507 - blaI penicillinase repressor BlaI core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 126 126 100.0 98.41 126 WP_001284656.1 penicillinase repressor BlaI SRR13967215_contigs SRR13967215_contigs.fa nucleotide SRR13967215_contig00002 3500 4906 - blaR1 beta-lactam sensor/signal transducer BlaR1 core AMR AMR BETA-LACTAM BETA-LACTAM INTERNAL_STOP 469 585 79.83 92.36 471 WP_001096392.1 beta-lactam sensor/signal transducer BlaR1 SRR13967215_contigs SRR13967215_contigs.fa nucleotide SRR13967215_contig00002 5360 6202 + blaZ penicillin-hydrolyzing class A beta-lactamase BlaZ core AMR AMR BETA-LACTAM BETA-LACTAM BLASTX 281 281 100.0 98.58 281 WP_000733274.1 penicillin-hydrolyzing class A beta-lactamase BlaZ SRR13967215_contigs SRR13967215_contigs.fa nucleotide SRR13967215_contig00015 20935 21351 + fosB FosB/FosD family fosfomycin resistance bacillithiol transferase core AMR AMR FOSFOMYCIN FOSFOMYCIN BLASTX 139 139 100.0 98.56 139 WP_000920239.1 FosB/FosD family fosfomycin resistance bacillithiol transferase